Gene : Cre10.g429750 C. reinhardtii v5.6
Defline:  (1 of 11) PF13426 - PAS domain (PAS_9) Genomic Order:  276
Name:  ? Cre10.g429750 Secondary Identifier:  ? PAC:30790138
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g429750 0.5kb upstream 0.5kb upstream 24112 true chromosome_10: 1632372-1656483 Chlamydomonas reinhardtii
Cre10.g429750 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 1632372-1632871 Chlamydomonas reinhardtii
Cre10.g429750 0.5kb downstream 0.5kb downstream 24112 true chromosome_10: 1632872-1656983 Chlamydomonas reinhardtii
Cre10.g429750 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 1656484-1656983 Chlamydomonas reinhardtii
Cre10.g429750 1.0kb upstream 1.0kb upstream 24612 true chromosome_10: 1631872-1656483 Chlamydomonas reinhardtii
Cre10.g429750 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 1631872-1632871 Chlamydomonas reinhardtii
Cre10.g429750 1.0kb downstream 1.0kb downstream 24612 true chromosome_10: 1632872-1657483 Chlamydomonas reinhardtii
Cre10.g429750 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 1656484-1657483 Chlamydomonas reinhardtii
Cre10.g429750 2.0kb upstream 2.0kb upstream 25612 true chromosome_10: 1630872-1656483 Chlamydomonas reinhardtii
Cre10.g429750 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 1630872-1632871 Chlamydomonas reinhardtii
Cre10.g429750 2.0kb downstream 2.0kb downstream 25612 true chromosome_10: 1632872-1658483 Chlamydomonas reinhardtii
Cre10.g429750 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 1656484-1658483 Chlamydomonas reinhardtii
Cre10.g429750 5.0kb upstream 5.0kb upstream 28612 true chromosome_10: 1627872-1656483 Chlamydomonas reinhardtii
Cre10.g429750 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 1627872-1632871 Chlamydomonas reinhardtii
Cre10.g429750 5.0kb downstream 5.0kb downstream 28612 true chromosome_10: 1632872-1661483 Chlamydomonas reinhardtii
Cre10.g429750 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 1656484-1661483 Chlamydomonas reinhardtii
Cre10.g429750 10.0kb upstream 10.0kb upstream 33612 true chromosome_10: 1622872-1656483 Chlamydomonas reinhardtii
Cre10.g429750 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 1622872-1632871 Chlamydomonas reinhardtii
Cre10.g429750 10.0kb downstream 10.0kb downstream 33612 true chromosome_10: 1632872-1666483 Chlamydomonas reinhardtii
Cre10.g429750 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 1656484-1666483 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086371 5260 Chlorophyte View MSA
123403728 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.318        
cufflinks 1.058        
cufflinks 0.882        
cufflinks 2.211        
cufflinks 1.092        
cufflinks 1.371        
cufflinks 1.078        
cufflinks 2.261        
cufflinks 1.532        
cufflinks 1.042        
cufflinks 0.906        
cufflinks 2.644       High
cufflinks 0.582       Low
cufflinks 1.199        
cufflinks 1.962        
cufflinks 2.302        
cufflinks 3.19       High
cufflinks 1.404        
cufflinks 0.411       Low
cufflinks 1.391        
cufflinks 2.832       High
cufflinks 3.182       High
cufflinks 0.472       Low
cufflinks 1.38        
cufflinks 3.247       High
cufflinks 8.97011 0.0 18.0424   High
cufflinks 4.72291 1.26435 8.18148    
cufflinks 6.11104 0.0 12.4087    
cufflinks 4.60414 0.256707 8.95158    
cufflinks 2.95114 0.566611 5.33567    

0 Strain