Gene : Cre01.g040400 C. reinhardtii v5.6
Genomic Order:  875 Name:  ? Cre01.g040400
Secondary Identifier:  ? PAC:30789620
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g040400 0.5kb upstream 0.5kb upstream 2915 true chromosome_1: 5672524-5675438 Chlamydomonas reinhardtii
Cre01.g040400 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5672524-5673023 Chlamydomonas reinhardtii
Cre01.g040400 0.5kb downstream 0.5kb downstream 2915 true chromosome_1: 5673024-5675938 Chlamydomonas reinhardtii
Cre01.g040400 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5675439-5675938 Chlamydomonas reinhardtii
Cre01.g040400 1.0kb upstream 1.0kb upstream 3415 true chromosome_1: 5672024-5675438 Chlamydomonas reinhardtii
Cre01.g040400 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5672024-5673023 Chlamydomonas reinhardtii
Cre01.g040400 1.0kb downstream 1.0kb downstream 3415 true chromosome_1: 5673024-5676438 Chlamydomonas reinhardtii
Cre01.g040400 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5675439-5676438 Chlamydomonas reinhardtii
Cre01.g040400 2.0kb upstream 2.0kb upstream 4415 true chromosome_1: 5671024-5675438 Chlamydomonas reinhardtii
Cre01.g040400 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5671024-5673023 Chlamydomonas reinhardtii
Cre01.g040400 2.0kb downstream 2.0kb downstream 4415 true chromosome_1: 5673024-5677438 Chlamydomonas reinhardtii
Cre01.g040400 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5675439-5677438 Chlamydomonas reinhardtii
Cre01.g040400 5.0kb upstream 5.0kb upstream 7415 true chromosome_1: 5668024-5675438 Chlamydomonas reinhardtii
Cre01.g040400 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5668024-5673023 Chlamydomonas reinhardtii
Cre01.g040400 5.0kb downstream 5.0kb downstream 7415 true chromosome_1: 5673024-5680438 Chlamydomonas reinhardtii
Cre01.g040400 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5675439-5680438 Chlamydomonas reinhardtii
Cre01.g040400 10.0kb upstream 10.0kb upstream 12415 true chromosome_1: 5663024-5675438 Chlamydomonas reinhardtii
Cre01.g040400 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5663024-5673023 Chlamydomonas reinhardtii
Cre01.g040400 10.0kb downstream 10.0kb downstream 12415 true chromosome_1: 5673024-5685438 Chlamydomonas reinhardtii
Cre01.g040400 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5675439-5685438 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086639 5260 Chlorophyte View MSA
123403959 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.821       Low
cufflinks 5.356        
cufflinks 5.572        
cufflinks 5.385        
cufflinks 4.616        
cufflinks 4.884        
cufflinks 5.007        
cufflinks 6.01       High
cufflinks 3.473       Low
cufflinks 5.843        
cufflinks 3.992       Low
cufflinks 4.483        
cufflinks 6.723       High
cufflinks 4.938        
cufflinks 4.786        
cufflinks 4.447        
cufflinks 5.915       High
cufflinks 4.724        
cufflinks 5.581     High  
cufflinks 4.902        
cufflinks 3.831       Low
cufflinks 3.734       Low
cufflinks 7.429       High
cufflinks 4.922        
cufflinks 4.282        
cufflinks 8.15258 1.12339 15.1818    
cufflinks 9.79903 1.07814 18.5199    
cufflinks 21.1782 0.0 42.877   High
cufflinks 7.01767 0.846515 13.1888   Low
cufflinks 8.20951 0.924752 15.4943   Low

0 Strain