Gene : IFT22 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g039200 Defline:  (1 of 1) K07935 - Rab-like protein 5 (RABL5)
Genomic Order:  849 Name:  ? Cre01.g039200
Secondary Identifier:  ? PAC:30789550
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g039200 0.5kb upstream 0.5kb upstream 2342 true chromosome_1: 5531846-5534187 Chlamydomonas reinhardtii
Cre01.g039200 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 5531846-5532345 Chlamydomonas reinhardtii
Cre01.g039200 0.5kb downstream 0.5kb downstream 2342 true chromosome_1: 5532346-5534687 Chlamydomonas reinhardtii
Cre01.g039200 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 5534188-5534687 Chlamydomonas reinhardtii
Cre01.g039200 1.0kb upstream 1.0kb upstream 2842 true chromosome_1: 5531346-5534187 Chlamydomonas reinhardtii
Cre01.g039200 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 5531346-5532345 Chlamydomonas reinhardtii
Cre01.g039200 1.0kb downstream 1.0kb downstream 2842 true chromosome_1: 5532346-5535187 Chlamydomonas reinhardtii
Cre01.g039200 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 5534188-5535187 Chlamydomonas reinhardtii
Cre01.g039200 2.0kb upstream 2.0kb upstream 3842 true chromosome_1: 5530346-5534187 Chlamydomonas reinhardtii
Cre01.g039200 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 5530346-5532345 Chlamydomonas reinhardtii
Cre01.g039200 2.0kb downstream 2.0kb downstream 3842 true chromosome_1: 5532346-5536187 Chlamydomonas reinhardtii
Cre01.g039200 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 5534188-5536187 Chlamydomonas reinhardtii
Cre01.g039200 5.0kb upstream 5.0kb upstream 6842 true chromosome_1: 5527346-5534187 Chlamydomonas reinhardtii
Cre01.g039200 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 5527346-5532345 Chlamydomonas reinhardtii
Cre01.g039200 5.0kb downstream 5.0kb downstream 6842 true chromosome_1: 5532346-5539187 Chlamydomonas reinhardtii
Cre01.g039200 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 5534188-5539187 Chlamydomonas reinhardtii
Cre01.g039200 10.0kb upstream 10.0kb upstream 11842 true chromosome_1: 5522346-5534187 Chlamydomonas reinhardtii
Cre01.g039200 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 5522346-5532345 Chlamydomonas reinhardtii
Cre01.g039200 10.0kb downstream 10.0kb downstream 11842 true chromosome_1: 5532346-5544187 Chlamydomonas reinhardtii
Cre01.g039200 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 5534188-5544187 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111070 5260 Chlorophyte View MSA
123423213 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.597       Low
cufflinks 33.447     High  
cufflinks 44.875     High  
cufflinks 50.486     High High
cufflinks 24.867     High  
cufflinks 30.728     High  
cufflinks 23.958     High  
cufflinks 35.671     High  
cufflinks 4.94       Low
cufflinks 31.097     High  
cufflinks 46.347     High High
cufflinks 28.025     High  
cufflinks 25.087     High  
cufflinks 31.593     High  
cufflinks 40.229     High  
cufflinks 11.924     High Low
cufflinks 10.099       Low
cufflinks 29.62     High  
cufflinks 29.253     High  
cufflinks 34.197     High  
cufflinks 31.095     High  
cufflinks 8.388       Low
cufflinks 40.285     High  
cufflinks 27.284     High  
cufflinks 7.073       Low
cufflinks 10.7002 1.81204 19.5884   High
cufflinks 22.9932 6.25795 39.7284    
cufflinks 32.7748 0.0 66.0387 High  
cufflinks 18.4366 2.38617 34.487    
cufflinks 21.2551 4.20761 38.3025    

0 Strain