Gene : PHC52 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g047265 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  1018 Name:  ? Cre01.g047265
Secondary Identifier:  ? PAC:30788552
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g047265 0.5kb upstream 0.5kb upstream 10347 true chromosome_1: 6598206-6608552 Chlamydomonas reinhardtii
Cre01.g047265 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 6598206-6598705 Chlamydomonas reinhardtii
Cre01.g047265 0.5kb downstream 0.5kb downstream 10347 true chromosome_1: 6598706-6609052 Chlamydomonas reinhardtii
Cre01.g047265 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 6608553-6609052 Chlamydomonas reinhardtii
Cre01.g047265 1.0kb upstream 1.0kb upstream 10847 true chromosome_1: 6597706-6608552 Chlamydomonas reinhardtii
Cre01.g047265 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 6597706-6598705 Chlamydomonas reinhardtii
Cre01.g047265 1.0kb downstream 1.0kb downstream 10847 true chromosome_1: 6598706-6609552 Chlamydomonas reinhardtii
Cre01.g047265 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 6608553-6609552 Chlamydomonas reinhardtii
Cre01.g047265 2.0kb upstream 2.0kb upstream 11847 true chromosome_1: 6596706-6608552 Chlamydomonas reinhardtii
Cre01.g047265 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 6596706-6598705 Chlamydomonas reinhardtii
Cre01.g047265 2.0kb downstream 2.0kb downstream 11847 true chromosome_1: 6598706-6610552 Chlamydomonas reinhardtii
Cre01.g047265 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 6608553-6610552 Chlamydomonas reinhardtii
Cre01.g047265 5.0kb upstream 5.0kb upstream 14847 true chromosome_1: 6593706-6608552 Chlamydomonas reinhardtii
Cre01.g047265 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 6593706-6598705 Chlamydomonas reinhardtii
Cre01.g047265 5.0kb downstream 5.0kb downstream 14847 true chromosome_1: 6598706-6613552 Chlamydomonas reinhardtii
Cre01.g047265 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 6608553-6613552 Chlamydomonas reinhardtii
Cre01.g047265 10.0kb upstream 10.0kb upstream 19847 true chromosome_1: 6588706-6608552 Chlamydomonas reinhardtii
Cre01.g047265 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 6588706-6598705 Chlamydomonas reinhardtii
Cre01.g047265 10.0kb downstream 10.0kb downstream 19847 true chromosome_1: 6598706-6618552 Chlamydomonas reinhardtii
Cre01.g047265 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 6608553-6618552 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080274 5260 Chlorophyte Singleton cluster - no MSA
123398068 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.58     High  
cufflinks 13.05     High  
cufflinks 12.531        
cufflinks 4.332        
cufflinks 4.298        
cufflinks 12.08        
cufflinks 9.778        
cufflinks 5.055        
cufflinks 5.801        
cufflinks 21.136     High High
cufflinks 1.112       Low
cufflinks 1.325       Low
cufflinks 10.206        
cufflinks 0.991       Low
cufflinks 10.312        
cufflinks 3.525        
cufflinks 23.33     High High
cufflinks 7.432        
cufflinks 0.108       Low
cufflinks 1.066       Low
cufflinks 2.726        
cufflinks 12.258     High  
cufflinks 6.411        
cufflinks 2.588        
cufflinks 13.048     High  
cufflinks 6.22683 0.692556 11.7611    
cufflinks 9.85226 2.65133 17.0532    
cufflinks 26.3253 0.0 54.3123   High
cufflinks 10.0409 0.641436 19.4403    
cufflinks 17.7073 1.97427 33.4403    

0 Strain