Gene : Cre01.g010832 C. reinhardtii v5.6
Defline:  (1 of 1) 3.4.22.16 - Cathepsin H / N-benzoylarginine-beta-naphthylamide hydrolase Genomic Order:  254
Name:  ? Cre01.g010832 Secondary Identifier:  ? PAC:30788783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g010832 0.5kb upstream 0.5kb upstream 8127 true chromosome_1: 2004896-2013022 Chlamydomonas reinhardtii
Cre01.g010832 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2004896-2005395 Chlamydomonas reinhardtii
Cre01.g010832 0.5kb downstream 0.5kb downstream 8127 true chromosome_1: 2005396-2013522 Chlamydomonas reinhardtii
Cre01.g010832 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2013023-2013522 Chlamydomonas reinhardtii
Cre01.g010832 1.0kb upstream 1.0kb upstream 8627 true chromosome_1: 2004396-2013022 Chlamydomonas reinhardtii
Cre01.g010832 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2004396-2005395 Chlamydomonas reinhardtii
Cre01.g010832 1.0kb downstream 1.0kb downstream 8627 true chromosome_1: 2005396-2014022 Chlamydomonas reinhardtii
Cre01.g010832 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2013023-2014022 Chlamydomonas reinhardtii
Cre01.g010832 2.0kb upstream 2.0kb upstream 9627 true chromosome_1: 2003396-2013022 Chlamydomonas reinhardtii
Cre01.g010832 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2003396-2005395 Chlamydomonas reinhardtii
Cre01.g010832 2.0kb downstream 2.0kb downstream 9627 true chromosome_1: 2005396-2015022 Chlamydomonas reinhardtii
Cre01.g010832 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2013023-2015022 Chlamydomonas reinhardtii
Cre01.g010832 5.0kb upstream 5.0kb upstream 12627 true chromosome_1: 2000396-2013022 Chlamydomonas reinhardtii
Cre01.g010832 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2000396-2005395 Chlamydomonas reinhardtii
Cre01.g010832 5.0kb downstream 5.0kb downstream 12627 true chromosome_1: 2005396-2018022 Chlamydomonas reinhardtii
Cre01.g010832 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2013023-2018022 Chlamydomonas reinhardtii
Cre01.g010832 10.0kb upstream 10.0kb upstream 17627 true chromosome_1: 1995396-2013022 Chlamydomonas reinhardtii
Cre01.g010832 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 1995396-2005395 Chlamydomonas reinhardtii
Cre01.g010832 10.0kb downstream 10.0kb downstream 17627 true chromosome_1: 2005396-2023022 Chlamydomonas reinhardtii
Cre01.g010832 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2013023-2023022 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080320 5260 Chlorophyte Singleton cluster - no MSA
123398110 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.104        
cufflinks 1.746        
cufflinks 0.395       Low
cufflinks 1.525        
cufflinks 0.844        
cufflinks 1.326        
cufflinks 14.042     High High
cufflinks 1.062        
cufflinks 3.78        
cufflinks 3.236        
cufflinks 2.902        
cufflinks 2.949        
cufflinks 0.421       Low
cufflinks 2.541        
cufflinks 2.796        
cufflinks 0.228       Low
cufflinks 1.032        
cufflinks 0.428       Low
cufflinks 10.701     High High
cufflinks 4.81        
cufflinks 1.667        
cufflinks 1.564        
cufflinks 8.413       High
cufflinks 2.377        
cufflinks 1.264        
cufflinks 3.00764 0.50553 5.50974   High
cufflinks 0.8707 0.0 1.85994    
cufflinks 1.37827 0.0 3.07061    
cufflinks 12.6949 0.771626 24.6182   High
cufflinks 10.5005 1.81939 19.1817    

0 Strain