Gene : FAP190 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g004550 Defline:  (1 of 2) PTHR22998 - SARM1
Genomic Order:  107 Name:  ? Cre01.g004550
Secondary Identifier:  ? PAC:30788925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g004550 0.5kb upstream 0.5kb upstream 6792 true chromosome_1: 864099-870890 Chlamydomonas reinhardtii
Cre01.g004550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 864099-864598 Chlamydomonas reinhardtii
Cre01.g004550 0.5kb downstream 0.5kb downstream 6792 true chromosome_1: 864599-871390 Chlamydomonas reinhardtii
Cre01.g004550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 870891-871390 Chlamydomonas reinhardtii
Cre01.g004550 1.0kb upstream 1.0kb upstream 7292 true chromosome_1: 863599-870890 Chlamydomonas reinhardtii
Cre01.g004550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 863599-864598 Chlamydomonas reinhardtii
Cre01.g004550 1.0kb downstream 1.0kb downstream 7292 true chromosome_1: 864599-871890 Chlamydomonas reinhardtii
Cre01.g004550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 870891-871890 Chlamydomonas reinhardtii
Cre01.g004550 2.0kb upstream 2.0kb upstream 8292 true chromosome_1: 862599-870890 Chlamydomonas reinhardtii
Cre01.g004550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 862599-864598 Chlamydomonas reinhardtii
Cre01.g004550 2.0kb downstream 2.0kb downstream 8292 true chromosome_1: 864599-872890 Chlamydomonas reinhardtii
Cre01.g004550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 870891-872890 Chlamydomonas reinhardtii
Cre01.g004550 5.0kb upstream 5.0kb upstream 11292 true chromosome_1: 859599-870890 Chlamydomonas reinhardtii
Cre01.g004550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 859599-864598 Chlamydomonas reinhardtii
Cre01.g004550 5.0kb downstream 5.0kb downstream 11292 true chromosome_1: 864599-875890 Chlamydomonas reinhardtii
Cre01.g004550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 870891-875890 Chlamydomonas reinhardtii
Cre01.g004550 10.0kb upstream 10.0kb upstream 16292 true chromosome_1: 854599-870890 Chlamydomonas reinhardtii
Cre01.g004550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 854599-864598 Chlamydomonas reinhardtii
Cre01.g004550 10.0kb downstream 10.0kb downstream 16292 true chromosome_1: 864599-880890 Chlamydomonas reinhardtii
Cre01.g004550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 870891-880890 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098250 5260 Chlorophyte View MSA
123414095 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.496       Low
cufflinks 2.125        
cufflinks 3.308        
cufflinks 5.23       High
cufflinks 1.354        
cufflinks 1.38        
cufflinks 1.637        
cufflinks 2.906        
cufflinks 0.386       Low
cufflinks 0.618       Low
cufflinks 9.22       High
cufflinks 2.316        
cufflinks 0.829        
cufflinks 1.391        
cufflinks 4.276       High
cufflinks 0.659       Low
cufflinks 0.857        
cufflinks 2.145        
cufflinks 0.771        
cufflinks 2.074        
cufflinks 3.401        
cufflinks 0.685        
cufflinks 1.442        
cufflinks 2.912        
cufflinks 0.502       Low
cufflinks 1.84631 0.252768 3.43985   High
cufflinks 6.96219 1.85118 12.0732    
cufflinks 5.92736 0.0 11.97    
cufflinks 5.28228 0.7658 9.79876   High
cufflinks 6.04745 1.21456 10.8803   Low

0 Strain