Gene : FAP335 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g002550 Defline:  (1 of 1) KOG0198//KOG0598//KOG0616 - MEKK and related serine/threonine protein kinases // Ribosomal protein S6 kinase and related proteins // cAMP-dependent protein kinase catalytic subunit (PKA)
Genomic Order:  59 Name:  ? Cre01.g002550
Secondary Identifier:  ? PAC:30789683
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g002550 0.5kb upstream 0.5kb upstream 7053 true chromosome_1: 444586-451638 Chlamydomonas reinhardtii
Cre01.g002550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 444586-445085 Chlamydomonas reinhardtii
Cre01.g002550 0.5kb downstream 0.5kb downstream 7053 true chromosome_1: 445086-452138 Chlamydomonas reinhardtii
Cre01.g002550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 451639-452138 Chlamydomonas reinhardtii
Cre01.g002550 1.0kb upstream 1.0kb upstream 7553 true chromosome_1: 444086-451638 Chlamydomonas reinhardtii
Cre01.g002550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 444086-445085 Chlamydomonas reinhardtii
Cre01.g002550 1.0kb downstream 1.0kb downstream 7553 true chromosome_1: 445086-452638 Chlamydomonas reinhardtii
Cre01.g002550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 451639-452638 Chlamydomonas reinhardtii
Cre01.g002550 2.0kb upstream 2.0kb upstream 8553 true chromosome_1: 443086-451638 Chlamydomonas reinhardtii
Cre01.g002550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 443086-445085 Chlamydomonas reinhardtii
Cre01.g002550 2.0kb downstream 2.0kb downstream 8553 true chromosome_1: 445086-453638 Chlamydomonas reinhardtii
Cre01.g002550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 451639-453638 Chlamydomonas reinhardtii
Cre01.g002550 5.0kb upstream 5.0kb upstream 11553 true chromosome_1: 440086-451638 Chlamydomonas reinhardtii
Cre01.g002550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 440086-445085 Chlamydomonas reinhardtii
Cre01.g002550 5.0kb downstream 5.0kb downstream 11553 true chromosome_1: 445086-456638 Chlamydomonas reinhardtii
Cre01.g002550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 451639-456638 Chlamydomonas reinhardtii
Cre01.g002550 10.0kb upstream 10.0kb upstream 16553 true chromosome_1: 435086-451638 Chlamydomonas reinhardtii
Cre01.g002550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 435086-445085 Chlamydomonas reinhardtii
Cre01.g002550 10.0kb downstream 10.0kb downstream 16553 true chromosome_1: 445086-461638 Chlamydomonas reinhardtii
Cre01.g002550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 451639-461638 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076245 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.334        
cufflinks 2.818        
cufflinks 11.578       High
cufflinks 16.301     High High
cufflinks 2.276        
cufflinks 2.669        
cufflinks 4.003        
cufflinks 6.439        
cufflinks 2.85        
cufflinks 1.157       Low
cufflinks 23.565     High High
cufflinks 6.008        
cufflinks 1.574       Low
cufflinks 2.716        
cufflinks 9.168       High
cufflinks 1.947       Low
cufflinks 3.375        
cufflinks 7.325        
cufflinks 1.613       Low
cufflinks 5.851        
cufflinks 8.92        
cufflinks 2.965        
cufflinks 3.948        
cufflinks 7.85        
cufflinks 2.768        
cufflinks 1.65068 0.185093 3.11627   High
cufflinks 4.00446 1.0126 6.99632    
cufflinks 6.12658 0.0 12.328    
cufflinks 6.09734 0.819883 11.3748   High
cufflinks 6.06797 1.2137 10.9222   Low

0 Strain