Gene : Cre01.g011800 C. reinhardtii v5.6
Defline:  (1 of 18) KOG0581 - Mitogen-activated protein kinase kinase (MAP2K) Genomic Order:  277
Name:  ? Cre01.g011800 Secondary Identifier:  ? PAC:30788849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g011800 0.5kb upstream 0.5kb upstream 8916 true chromosome_1: 2154460-2163375 Chlamydomonas reinhardtii
Cre01.g011800 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 2162876-2163375 Chlamydomonas reinhardtii
Cre01.g011800 0.5kb downstream 0.5kb downstream 8916 true chromosome_1: 2153960-2162875 Chlamydomonas reinhardtii
Cre01.g011800 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 2153960-2154459 Chlamydomonas reinhardtii
Cre01.g011800 1.0kb upstream 1.0kb upstream 9416 true chromosome_1: 2154460-2163875 Chlamydomonas reinhardtii
Cre01.g011800 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 2162876-2163875 Chlamydomonas reinhardtii
Cre01.g011800 1.0kb downstream 1.0kb downstream 9416 true chromosome_1: 2153460-2162875 Chlamydomonas reinhardtii
Cre01.g011800 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 2153460-2154459 Chlamydomonas reinhardtii
Cre01.g011800 2.0kb upstream 2.0kb upstream 10416 true chromosome_1: 2154460-2164875 Chlamydomonas reinhardtii
Cre01.g011800 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 2162876-2164875 Chlamydomonas reinhardtii
Cre01.g011800 2.0kb downstream 2.0kb downstream 10416 true chromosome_1: 2152460-2162875 Chlamydomonas reinhardtii
Cre01.g011800 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 2152460-2154459 Chlamydomonas reinhardtii
Cre01.g011800 5.0kb upstream 5.0kb upstream 13416 true chromosome_1: 2154460-2167875 Chlamydomonas reinhardtii
Cre01.g011800 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 2162876-2167875 Chlamydomonas reinhardtii
Cre01.g011800 5.0kb downstream 5.0kb downstream 13416 true chromosome_1: 2149460-2162875 Chlamydomonas reinhardtii
Cre01.g011800 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 2149460-2154459 Chlamydomonas reinhardtii
Cre01.g011800 10.0kb upstream 10.0kb upstream 18416 true chromosome_1: 2154460-2172875 Chlamydomonas reinhardtii
Cre01.g011800 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 2162876-2172875 Chlamydomonas reinhardtii
Cre01.g011800 10.0kb downstream 10.0kb downstream 18416 true chromosome_1: 2144460-2162875 Chlamydomonas reinhardtii
Cre01.g011800 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 2144460-2154459 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113211 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low Low
cufflinks 0.435        
cufflinks 0.362        
cufflinks 0.26        
cufflinks 0.569        
cufflinks 0.365        
cufflinks 0.591        
cufflinks 0.292        
cufflinks 0.262        
cufflinks 0.128       Low
cufflinks 0.265        
cufflinks 0.773        
cufflinks 0.258        
cufflinks 0.455        
cufflinks 0.626        
cufflinks 0.129       Low
cufflinks 0.527        
cufflinks 0.319        
cufflinks 0.125       Low
cufflinks 3.266       High
cufflinks 0.719        
cufflinks 0.272        
cufflinks 1.66       High
cufflinks 0.247        
cufflinks 0.62        
cufflinks 0.00151637 0.0 0.00964909 Low Low
cufflinks 0.0208916 0.0 0.0996584 Low Low
cufflinks 4.12215 0.0 8.33737   High
cufflinks 0.0127469 0.0 0.0389897 Low  
cufflinks 1.35304 0.126533 2.57954   Low

0 Strain