Gene : Cucsa.016510 C. sativus v1.0
Defline:  (1 of 1) PTHR23083//PTHR23083:SF430 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  17
Name:  ? Cucsa.016510 Secondary Identifier:  ? PAC:16951679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.016510 0.5kb upstream 0.5kb upstream 5995 true scaffold00227: 220783-226777 Cucumis sativus
Cucsa.016510 0.5kb upstream 0.5kb upstream 500 false scaffold00227: 226278-226777 Cucumis sativus
Cucsa.016510 0.5kb downstream 0.5kb downstream 5995 true scaffold00227: 220283-226277 Cucumis sativus
Cucsa.016510 0.5kb downstream 0.5kb downstream 500 false scaffold00227: 220283-220782 Cucumis sativus
Cucsa.016510 1.0kb upstream 1.0kb upstream 6495 true scaffold00227: 220783-227277 Cucumis sativus
Cucsa.016510 1.0kb upstream 1.0kb upstream 1000 false scaffold00227: 226278-227277 Cucumis sativus
Cucsa.016510 1.0kb downstream 1.0kb downstream 6495 true scaffold00227: 219783-226277 Cucumis sativus
Cucsa.016510 1.0kb downstream 1.0kb downstream 1000 false scaffold00227: 219783-220782 Cucumis sativus
Cucsa.016510 2.0kb upstream 2.0kb upstream 7495 true scaffold00227: 220783-228277 Cucumis sativus
Cucsa.016510 2.0kb upstream 2.0kb upstream 2000 false scaffold00227: 226278-228277 Cucumis sativus
Cucsa.016510 2.0kb downstream 2.0kb downstream 7495 true scaffold00227: 218783-226277 Cucumis sativus
Cucsa.016510 2.0kb downstream 2.0kb downstream 2000 false scaffold00227: 218783-220782 Cucumis sativus
Cucsa.016510 5.0kb upstream 5.0kb upstream 10495 true scaffold00227: 220783-231277 Cucumis sativus
Cucsa.016510 5.0kb upstream 5.0kb upstream 5000 false scaffold00227: 226278-231277 Cucumis sativus
Cucsa.016510 5.0kb downstream 5.0kb downstream 10495 true scaffold00227: 215783-226277 Cucumis sativus
Cucsa.016510 5.0kb downstream 5.0kb downstream 5000 false scaffold00227: 215783-220782 Cucumis sativus
Cucsa.016510 10.0kb upstream 10.0kb upstream 15495 true scaffold00227: 220783-236277 Cucumis sativus
Cucsa.016510 10.0kb upstream 10.0kb upstream 10000 false scaffold00227: 226278-236277 Cucumis sativus
Cucsa.016510 10.0kb downstream 10.0kb downstream 15495 true scaffold00227: 210783-226277 Cucumis sativus
Cucsa.016510 10.0kb downstream 10.0kb downstream 10000 false scaffold00227: 210783-220782 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311802 5265 Fabidae View MSA
124067211 5270 Rosid View MSA
123736449 5271 Pentapetalae View MSA
122791589 5272 Eudicot View MSA
122042735 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain