Gene : Cucsa.169920 C. sativus v1.0
Defline:  (1 of 1) PF00289//PF02785//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  10
Name:  ? Cucsa.169920 Secondary Identifier:  ? PAC:16966428
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY0-1264 Cucumis sativus pathologic  
Csativus PWY-4381 Cucumis sativus pathologic  
Csativus PWY-5156 Cucumis sativus pathologic  
Csativus PWY-7388 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.169920 0.5kb upstream 0.5kb upstream 12554 true scaffold01174: 156485-169038 Cucumis sativus
Cucsa.169920 0.5kb upstream 0.5kb upstream 500 false scaffold01174: 156485-156984 Cucumis sativus
Cucsa.169920 0.5kb downstream 0.5kb downstream 12554 true scaffold01174: 156985-169538 Cucumis sativus
Cucsa.169920 0.5kb downstream 0.5kb downstream 500 false scaffold01174: 169039-169538 Cucumis sativus
Cucsa.169920 1.0kb upstream 1.0kb upstream 13054 true scaffold01174: 155985-169038 Cucumis sativus
Cucsa.169920 1.0kb upstream 1.0kb upstream 1000 false scaffold01174: 155985-156984 Cucumis sativus
Cucsa.169920 1.0kb downstream 1.0kb downstream 13054 true scaffold01174: 156985-170038 Cucumis sativus
Cucsa.169920 1.0kb downstream 1.0kb downstream 1000 false scaffold01174: 169039-170038 Cucumis sativus
Cucsa.169920 2.0kb upstream 2.0kb upstream 14054 true scaffold01174: 154985-169038 Cucumis sativus
Cucsa.169920 2.0kb upstream 2.0kb upstream 2000 false scaffold01174: 154985-156984 Cucumis sativus
Cucsa.169920 2.0kb downstream 2.0kb downstream 14054 true scaffold01174: 156985-171038 Cucumis sativus
Cucsa.169920 2.0kb downstream 2.0kb downstream 2000 false scaffold01174: 169039-171038 Cucumis sativus
Cucsa.169920 5.0kb upstream 5.0kb upstream 17054 true scaffold01174: 151985-169038 Cucumis sativus
Cucsa.169920 5.0kb upstream 5.0kb upstream 5000 false scaffold01174: 151985-156984 Cucumis sativus
Cucsa.169920 5.0kb downstream 5.0kb downstream 17054 true scaffold01174: 156985-174038 Cucumis sativus
Cucsa.169920 5.0kb downstream 5.0kb downstream 5000 false scaffold01174: 169039-174038 Cucumis sativus
Cucsa.169920 10.0kb upstream 10.0kb upstream 22054 true scaffold01174: 146985-169038 Cucumis sativus
Cucsa.169920 10.0kb upstream 10.0kb upstream 10000 false scaffold01174: 146985-156984 Cucumis sativus
Cucsa.169920 10.0kb downstream 10.0kb downstream 22054 true scaffold01174: 156985-179038 Cucumis sativus
Cucsa.169920 10.0kb downstream 10.0kb downstream 10000 false scaffold01174: 169039-179038 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303973 5265 Fabidae View MSA
124069238 5270 Rosid View MSA
123745684 5271 Pentapetalae View MSA
122794668 5272 Eudicot View MSA
122048347 5273 Angiosperm View MSA
121348356 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain