Gene : Cucsa.178850 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  77
Name:  ? Cucsa.178850 Secondary Identifier:  ? PAC:16967167
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.178850 0.5kb upstream 0.5kb upstream 4581 true scaffold01227: 1228764-1233344 Cucumis sativus
Cucsa.178850 0.5kb upstream 0.5kb upstream 500 false scaffold01227: 1232845-1233344 Cucumis sativus
Cucsa.178850 0.5kb downstream 0.5kb downstream 4581 true scaffold01227: 1228264-1232844 Cucumis sativus
Cucsa.178850 0.5kb downstream 0.5kb downstream 500 false scaffold01227: 1228264-1228763 Cucumis sativus
Cucsa.178850 1.0kb upstream 1.0kb upstream 5081 true scaffold01227: 1228764-1233844 Cucumis sativus
Cucsa.178850 1.0kb upstream 1.0kb upstream 1000 false scaffold01227: 1232845-1233844 Cucumis sativus
Cucsa.178850 1.0kb downstream 1.0kb downstream 5081 true scaffold01227: 1227764-1232844 Cucumis sativus
Cucsa.178850 1.0kb downstream 1.0kb downstream 1000 false scaffold01227: 1227764-1228763 Cucumis sativus
Cucsa.178850 2.0kb upstream 2.0kb upstream 6081 true scaffold01227: 1228764-1234844 Cucumis sativus
Cucsa.178850 2.0kb upstream 2.0kb upstream 2000 false scaffold01227: 1232845-1234844 Cucumis sativus
Cucsa.178850 2.0kb downstream 2.0kb downstream 6081 true scaffold01227: 1226764-1232844 Cucumis sativus
Cucsa.178850 2.0kb downstream 2.0kb downstream 2000 false scaffold01227: 1226764-1228763 Cucumis sativus
Cucsa.178850 5.0kb upstream 5.0kb upstream 9081 true scaffold01227: 1228764-1237844 Cucumis sativus
Cucsa.178850 5.0kb upstream 5.0kb upstream 5000 false scaffold01227: 1232845-1237844 Cucumis sativus
Cucsa.178850 5.0kb downstream 5.0kb downstream 9081 true scaffold01227: 1223764-1232844 Cucumis sativus
Cucsa.178850 5.0kb downstream 5.0kb downstream 5000 false scaffold01227: 1223764-1228763 Cucumis sativus
Cucsa.178850 10.0kb upstream 10.0kb upstream 14081 true scaffold01227: 1228764-1242844 Cucumis sativus
Cucsa.178850 10.0kb upstream 10.0kb upstream 10000 false scaffold01227: 1232845-1242844 Cucumis sativus
Cucsa.178850 10.0kb downstream 10.0kb downstream 14081 true scaffold01227: 1218764-1232844 Cucumis sativus
Cucsa.178850 10.0kb downstream 10.0kb downstream 10000 false scaffold01227: 1218764-1228763 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302304 5265 Fabidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain