Gene : Cucsa.178200 C. sativus v1.0
Defline:  (1 of 1) PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1 Genomic Order:  12
Name:  ? Cucsa.178200 Secondary Identifier:  ? PAC:16967065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.178200 0.5kb upstream 0.5kb upstream 51964 true scaffold01227: 184271-236234 Cucumis sativus
Cucsa.178200 0.5kb upstream 0.5kb upstream 500 false scaffold01227: 184271-184770 Cucumis sativus
Cucsa.178200 0.5kb downstream 0.5kb downstream 51964 true scaffold01227: 184771-236734 Cucumis sativus
Cucsa.178200 0.5kb downstream 0.5kb downstream 500 false scaffold01227: 236235-236734 Cucumis sativus
Cucsa.178200 1.0kb upstream 1.0kb upstream 52464 true scaffold01227: 183771-236234 Cucumis sativus
Cucsa.178200 1.0kb upstream 1.0kb upstream 1000 false scaffold01227: 183771-184770 Cucumis sativus
Cucsa.178200 1.0kb downstream 1.0kb downstream 52464 true scaffold01227: 184771-237234 Cucumis sativus
Cucsa.178200 1.0kb downstream 1.0kb downstream 1000 false scaffold01227: 236235-237234 Cucumis sativus
Cucsa.178200 2.0kb upstream 2.0kb upstream 53464 true scaffold01227: 182771-236234 Cucumis sativus
Cucsa.178200 2.0kb upstream 2.0kb upstream 2000 false scaffold01227: 182771-184770 Cucumis sativus
Cucsa.178200 2.0kb downstream 2.0kb downstream 53464 true scaffold01227: 184771-238234 Cucumis sativus
Cucsa.178200 2.0kb downstream 2.0kb downstream 2000 false scaffold01227: 236235-238234 Cucumis sativus
Cucsa.178200 5.0kb upstream 5.0kb upstream 56464 true scaffold01227: 179771-236234 Cucumis sativus
Cucsa.178200 5.0kb upstream 5.0kb upstream 5000 false scaffold01227: 179771-184770 Cucumis sativus
Cucsa.178200 5.0kb downstream 5.0kb downstream 56464 true scaffold01227: 184771-241234 Cucumis sativus
Cucsa.178200 5.0kb downstream 5.0kb downstream 5000 false scaffold01227: 236235-241234 Cucumis sativus
Cucsa.178200 10.0kb upstream 10.0kb upstream 61464 true scaffold01227: 174771-236234 Cucumis sativus
Cucsa.178200 10.0kb upstream 10.0kb upstream 10000 false scaffold01227: 174771-184770 Cucumis sativus
Cucsa.178200 10.0kb downstream 10.0kb downstream 61464 true scaffold01227: 184771-246234 Cucumis sativus
Cucsa.178200 10.0kb downstream 10.0kb downstream 10000 false scaffold01227: 236235-246234 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303043 5265 Fabidae View MSA
124050351 5270 Rosid View MSA
123740065 5271 Pentapetalae View MSA
122789609 5272 Eudicot View MSA
122050896 5273 Angiosperm View MSA
121346458 5274 Embryophyte View MSA
123425740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain