Gene : Cucsa.355720 C. sativus v1.0
Defline:  (1 of 1) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN Genomic Order:  16
Name:  ? Cucsa.355720 Secondary Identifier:  ? PAC:16980206
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.355720 0.5kb upstream 0.5kb upstream 6888 true scaffold03577: 235395-242282 Cucumis sativus
Cucsa.355720 0.5kb upstream 0.5kb upstream 500 false scaffold03577: 235395-235894 Cucumis sativus
Cucsa.355720 0.5kb downstream 0.5kb downstream 6888 true scaffold03577: 235895-242782 Cucumis sativus
Cucsa.355720 0.5kb downstream 0.5kb downstream 500 false scaffold03577: 242283-242782 Cucumis sativus
Cucsa.355720 1.0kb upstream 1.0kb upstream 7388 true scaffold03577: 234895-242282 Cucumis sativus
Cucsa.355720 1.0kb upstream 1.0kb upstream 1000 false scaffold03577: 234895-235894 Cucumis sativus
Cucsa.355720 1.0kb downstream 1.0kb downstream 7388 true scaffold03577: 235895-243282 Cucumis sativus
Cucsa.355720 1.0kb downstream 1.0kb downstream 1000 false scaffold03577: 242283-243282 Cucumis sativus
Cucsa.355720 2.0kb upstream 2.0kb upstream 8388 true scaffold03577: 233895-242282 Cucumis sativus
Cucsa.355720 2.0kb upstream 2.0kb upstream 2000 false scaffold03577: 233895-235894 Cucumis sativus
Cucsa.355720 2.0kb downstream 2.0kb downstream 8388 true scaffold03577: 235895-244282 Cucumis sativus
Cucsa.355720 2.0kb downstream 2.0kb downstream 2000 false scaffold03577: 242283-244282 Cucumis sativus
Cucsa.355720 5.0kb upstream 5.0kb upstream 11388 true scaffold03577: 230895-242282 Cucumis sativus
Cucsa.355720 5.0kb upstream 5.0kb upstream 5000 false scaffold03577: 230895-235894 Cucumis sativus
Cucsa.355720 5.0kb downstream 5.0kb downstream 11388 true scaffold03577: 235895-247282 Cucumis sativus
Cucsa.355720 5.0kb downstream 5.0kb downstream 5000 false scaffold03577: 242283-247282 Cucumis sativus
Cucsa.355720 10.0kb upstream 10.0kb upstream 16388 true scaffold03577: 225895-242282 Cucumis sativus
Cucsa.355720 10.0kb upstream 10.0kb upstream 10000 false scaffold03577: 225895-235894 Cucumis sativus
Cucsa.355720 10.0kb downstream 10.0kb downstream 16388 true scaffold03577: 235895-252282 Cucumis sativus
Cucsa.355720 10.0kb downstream 10.0kb downstream 10000 false scaffold03577: 242283-252282 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301139 5265 Fabidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain