Gene : Cucsa.153620 C. sativus v1.0
Defline:  (1 of 12) PTHR11771:SF42 - PROTEIN C13C4.7 Genomic Order:  105
Name:  ? Cucsa.153620 Secondary Identifier:  ? PAC:16964714
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5409 Cucumis sativus pathologic  
Csativus PWY-5410 Cucumis sativus pathologic  
Csativus PWY-735 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.153620 0.5kb upstream 0.5kb upstream 5006 true scaffold01124: 650535-655540 Cucumis sativus
Cucsa.153620 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 650535-651034 Cucumis sativus
Cucsa.153620 0.5kb downstream 0.5kb downstream 5006 true scaffold01124: 651035-656040 Cucumis sativus
Cucsa.153620 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 655541-656040 Cucumis sativus
Cucsa.153620 1.0kb upstream 1.0kb upstream 5506 true scaffold01124: 650035-655540 Cucumis sativus
Cucsa.153620 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 650035-651034 Cucumis sativus
Cucsa.153620 1.0kb downstream 1.0kb downstream 5506 true scaffold01124: 651035-656540 Cucumis sativus
Cucsa.153620 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 655541-656540 Cucumis sativus
Cucsa.153620 2.0kb upstream 2.0kb upstream 6506 true scaffold01124: 649035-655540 Cucumis sativus
Cucsa.153620 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 649035-651034 Cucumis sativus
Cucsa.153620 2.0kb downstream 2.0kb downstream 6506 true scaffold01124: 651035-657540 Cucumis sativus
Cucsa.153620 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 655541-657540 Cucumis sativus
Cucsa.153620 5.0kb upstream 5.0kb upstream 9506 true scaffold01124: 646035-655540 Cucumis sativus
Cucsa.153620 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 646035-651034 Cucumis sativus
Cucsa.153620 5.0kb downstream 5.0kb downstream 9506 true scaffold01124: 651035-660540 Cucumis sativus
Cucsa.153620 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 655541-660540 Cucumis sativus
Cucsa.153620 10.0kb upstream 10.0kb upstream 14506 true scaffold01124: 641035-655540 Cucumis sativus
Cucsa.153620 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 641035-651034 Cucumis sativus
Cucsa.153620 10.0kb downstream 10.0kb downstream 14506 true scaffold01124: 651035-665540 Cucumis sativus
Cucsa.153620 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 655541-665540 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237673 5265 Fabidae View MSA
124072930 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain