Gene : Cucsa.128170 C. sativus v1.0
Defline:  (1 of 3) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  35
Name:  ? Cucsa.128170 Secondary Identifier:  ? PAC:16962133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.128170 0.5kb upstream 0.5kb upstream 4569 true scaffold01024: 260670-265238 Cucumis sativus
Cucsa.128170 0.5kb upstream 0.5kb upstream 500 false scaffold01024: 264739-265238 Cucumis sativus
Cucsa.128170 0.5kb downstream 0.5kb downstream 4569 true scaffold01024: 260170-264738 Cucumis sativus
Cucsa.128170 0.5kb downstream 0.5kb downstream 500 false scaffold01024: 260170-260669 Cucumis sativus
Cucsa.128170 1.0kb upstream 1.0kb upstream 5069 true scaffold01024: 260670-265738 Cucumis sativus
Cucsa.128170 1.0kb upstream 1.0kb upstream 1000 false scaffold01024: 264739-265738 Cucumis sativus
Cucsa.128170 1.0kb downstream 1.0kb downstream 5069 true scaffold01024: 259670-264738 Cucumis sativus
Cucsa.128170 1.0kb downstream 1.0kb downstream 1000 false scaffold01024: 259670-260669 Cucumis sativus
Cucsa.128170 2.0kb upstream 2.0kb upstream 6069 true scaffold01024: 260670-266738 Cucumis sativus
Cucsa.128170 2.0kb upstream 2.0kb upstream 2000 false scaffold01024: 264739-266738 Cucumis sativus
Cucsa.128170 2.0kb downstream 2.0kb downstream 6069 true scaffold01024: 258670-264738 Cucumis sativus
Cucsa.128170 2.0kb downstream 2.0kb downstream 2000 false scaffold01024: 258670-260669 Cucumis sativus
Cucsa.128170 5.0kb upstream 5.0kb upstream 9069 true scaffold01024: 260670-269738 Cucumis sativus
Cucsa.128170 5.0kb upstream 5.0kb upstream 5000 false scaffold01024: 264739-269738 Cucumis sativus
Cucsa.128170 5.0kb downstream 5.0kb downstream 9069 true scaffold01024: 255670-264738 Cucumis sativus
Cucsa.128170 5.0kb downstream 5.0kb downstream 5000 false scaffold01024: 255670-260669 Cucumis sativus
Cucsa.128170 10.0kb upstream 10.0kb upstream 14069 true scaffold01024: 260670-274738 Cucumis sativus
Cucsa.128170 10.0kb upstream 10.0kb upstream 10000 false scaffold01024: 264739-274738 Cucumis sativus
Cucsa.128170 10.0kb downstream 10.0kb downstream 14069 true scaffold01024: 250670-264738 Cucumis sativus
Cucsa.128170 10.0kb downstream 10.0kb downstream 10000 false scaffold01024: 250670-260669 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603083 5273 Angiosperm Singleton cluster - no MSA
122233329 5265 Fabidae Singleton cluster - no MSA
123979558 5270 Rosid Singleton cluster - no MSA
123555235 5271 Pentapetalae Singleton cluster - no MSA
122590049 5272 Eudicot Singleton cluster - no MSA
120875373 5274 Embryophyte Singleton cluster - no MSA
122916264 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain