Gene : Cucsa.142920 C. sativus v1.0
Defline:  (1 of 1) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  139
Name:  ? Cucsa.142920 Secondary Identifier:  ? PAC:16963708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6773 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142920 0.5kb upstream 0.5kb upstream 54442 true scaffold01079: 1154006-1208447 Cucumis sativus
Cucsa.142920 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 1207948-1208447 Cucumis sativus
Cucsa.142920 0.5kb downstream 0.5kb downstream 54442 true scaffold01079: 1153506-1207947 Cucumis sativus
Cucsa.142920 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 1153506-1154005 Cucumis sativus
Cucsa.142920 1.0kb upstream 1.0kb upstream 54942 true scaffold01079: 1154006-1208947 Cucumis sativus
Cucsa.142920 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 1207948-1208947 Cucumis sativus
Cucsa.142920 1.0kb downstream 1.0kb downstream 54942 true scaffold01079: 1153006-1207947 Cucumis sativus
Cucsa.142920 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 1153006-1154005 Cucumis sativus
Cucsa.142920 2.0kb upstream 2.0kb upstream 55942 true scaffold01079: 1154006-1209947 Cucumis sativus
Cucsa.142920 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 1207948-1209947 Cucumis sativus
Cucsa.142920 2.0kb downstream 2.0kb downstream 55942 true scaffold01079: 1152006-1207947 Cucumis sativus
Cucsa.142920 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 1152006-1154005 Cucumis sativus
Cucsa.142920 5.0kb upstream 5.0kb upstream 58942 true scaffold01079: 1154006-1212947 Cucumis sativus
Cucsa.142920 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 1207948-1212947 Cucumis sativus
Cucsa.142920 5.0kb downstream 5.0kb downstream 58942 true scaffold01079: 1149006-1207947 Cucumis sativus
Cucsa.142920 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 1149006-1154005 Cucumis sativus
Cucsa.142920 10.0kb upstream 10.0kb upstream 63942 true scaffold01079: 1154006-1217947 Cucumis sativus
Cucsa.142920 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 1207948-1217947 Cucumis sativus
Cucsa.142920 10.0kb downstream 10.0kb downstream 63942 true scaffold01079: 1144006-1207947 Cucumis sativus
Cucsa.142920 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 1144006-1154005 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303104 5265 Fabidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain