Gene : Cucsa.124980 C. sativus v1.0
Defline:  (1 of 4) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  106
Name:  ? Cucsa.124980 Secondary Identifier:  ? PAC:16961795
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BRANCHED-CHAIN-AA-SYN-PWY Cucumis sativus pathologic  
Csativus ILEUSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124980 0.5kb upstream 0.5kb upstream 3889 true scaffold01001: 783556-787444 Cucumis sativus
Cucsa.124980 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 786945-787444 Cucumis sativus
Cucsa.124980 0.5kb downstream 0.5kb downstream 3889 true scaffold01001: 783056-786944 Cucumis sativus
Cucsa.124980 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 783056-783555 Cucumis sativus
Cucsa.124980 1.0kb upstream 1.0kb upstream 4389 true scaffold01001: 783556-787944 Cucumis sativus
Cucsa.124980 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 786945-787944 Cucumis sativus
Cucsa.124980 1.0kb downstream 1.0kb downstream 4389 true scaffold01001: 782556-786944 Cucumis sativus
Cucsa.124980 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 782556-783555 Cucumis sativus
Cucsa.124980 2.0kb upstream 2.0kb upstream 5389 true scaffold01001: 783556-788944 Cucumis sativus
Cucsa.124980 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 786945-788944 Cucumis sativus
Cucsa.124980 2.0kb downstream 2.0kb downstream 5389 true scaffold01001: 781556-786944 Cucumis sativus
Cucsa.124980 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 781556-783555 Cucumis sativus
Cucsa.124980 5.0kb upstream 5.0kb upstream 8389 true scaffold01001: 783556-791944 Cucumis sativus
Cucsa.124980 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 786945-791944 Cucumis sativus
Cucsa.124980 5.0kb downstream 5.0kb downstream 8389 true scaffold01001: 778556-786944 Cucumis sativus
Cucsa.124980 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 778556-783555 Cucumis sativus
Cucsa.124980 10.0kb upstream 10.0kb upstream 13389 true scaffold01001: 783556-796944 Cucumis sativus
Cucsa.124980 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 786945-796944 Cucumis sativus
Cucsa.124980 10.0kb downstream 10.0kb downstream 13389 true scaffold01001: 773556-786944 Cucumis sativus
Cucsa.124980 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 773556-783555 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603046 5273 Angiosperm Singleton cluster - no MSA
122233292 5265 Fabidae Singleton cluster - no MSA
123979521 5270 Rosid Singleton cluster - no MSA
123555198 5271 Pentapetalae Singleton cluster - no MSA
122590012 5272 Eudicot Singleton cluster - no MSA
120875336 5274 Embryophyte Singleton cluster - no MSA
122916227 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain