Gene : Cucsa.109570 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  52
Name:  ? Cucsa.109570 Secondary Identifier:  ? PAC:16959890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.109570 0.5kb upstream 0.5kb upstream 13064 true scaffold00934: 480702-493765 Cucumis sativus
Cucsa.109570 0.5kb upstream 0.5kb upstream 500 false scaffold00934: 480702-481201 Cucumis sativus
Cucsa.109570 0.5kb downstream 0.5kb downstream 13064 true scaffold00934: 481202-494265 Cucumis sativus
Cucsa.109570 0.5kb downstream 0.5kb downstream 500 false scaffold00934: 493766-494265 Cucumis sativus
Cucsa.109570 1.0kb upstream 1.0kb upstream 13564 true scaffold00934: 480202-493765 Cucumis sativus
Cucsa.109570 1.0kb upstream 1.0kb upstream 1000 false scaffold00934: 480202-481201 Cucumis sativus
Cucsa.109570 1.0kb downstream 1.0kb downstream 13564 true scaffold00934: 481202-494765 Cucumis sativus
Cucsa.109570 1.0kb downstream 1.0kb downstream 1000 false scaffold00934: 493766-494765 Cucumis sativus
Cucsa.109570 2.0kb upstream 2.0kb upstream 14564 true scaffold00934: 479202-493765 Cucumis sativus
Cucsa.109570 2.0kb upstream 2.0kb upstream 2000 false scaffold00934: 479202-481201 Cucumis sativus
Cucsa.109570 2.0kb downstream 2.0kb downstream 14564 true scaffold00934: 481202-495765 Cucumis sativus
Cucsa.109570 2.0kb downstream 2.0kb downstream 2000 false scaffold00934: 493766-495765 Cucumis sativus
Cucsa.109570 5.0kb upstream 5.0kb upstream 17564 true scaffold00934: 476202-493765 Cucumis sativus
Cucsa.109570 5.0kb upstream 5.0kb upstream 5000 false scaffold00934: 476202-481201 Cucumis sativus
Cucsa.109570 5.0kb downstream 5.0kb downstream 17564 true scaffold00934: 481202-498765 Cucumis sativus
Cucsa.109570 5.0kb downstream 5.0kb downstream 5000 false scaffold00934: 493766-498765 Cucumis sativus
Cucsa.109570 10.0kb upstream 10.0kb upstream 22564 true scaffold00934: 471202-493765 Cucumis sativus
Cucsa.109570 10.0kb upstream 10.0kb upstream 10000 false scaffold00934: 471202-481201 Cucumis sativus
Cucsa.109570 10.0kb downstream 10.0kb downstream 22564 true scaffold00934: 481202-503765 Cucumis sativus
Cucsa.109570 10.0kb downstream 10.0kb downstream 10000 false scaffold00934: 493766-503765 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308481 5265 Fabidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain