Gene : Cucsa.109980 C. sativus v1.0
Defline:  (1 of 1) PTHR11139:SF71 - SERINE/THREONINE-PROTEIN KINASE SMG1 Genomic Order:  92
Name:  ? Cucsa.109980 Secondary Identifier:  ? PAC:16959967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.109980 0.5kb upstream 0.5kb upstream 19839 true scaffold00934: 869722-889560 Cucumis sativus
Cucsa.109980 0.5kb upstream 0.5kb upstream 500 false scaffold00934: 889061-889560 Cucumis sativus
Cucsa.109980 0.5kb downstream 0.5kb downstream 19839 true scaffold00934: 869222-889060 Cucumis sativus
Cucsa.109980 0.5kb downstream 0.5kb downstream 500 false scaffold00934: 869222-869721 Cucumis sativus
Cucsa.109980 1.0kb upstream 1.0kb upstream 20339 true scaffold00934: 869722-890060 Cucumis sativus
Cucsa.109980 1.0kb upstream 1.0kb upstream 1000 false scaffold00934: 889061-890060 Cucumis sativus
Cucsa.109980 1.0kb downstream 1.0kb downstream 20339 true scaffold00934: 868722-889060 Cucumis sativus
Cucsa.109980 1.0kb downstream 1.0kb downstream 1000 false scaffold00934: 868722-869721 Cucumis sativus
Cucsa.109980 2.0kb upstream 2.0kb upstream 21339 true scaffold00934: 869722-891060 Cucumis sativus
Cucsa.109980 2.0kb upstream 2.0kb upstream 2000 false scaffold00934: 889061-891060 Cucumis sativus
Cucsa.109980 2.0kb downstream 2.0kb downstream 21339 true scaffold00934: 867722-889060 Cucumis sativus
Cucsa.109980 2.0kb downstream 2.0kb downstream 2000 false scaffold00934: 867722-869721 Cucumis sativus
Cucsa.109980 5.0kb upstream 5.0kb upstream 24339 true scaffold00934: 869722-894060 Cucumis sativus
Cucsa.109980 5.0kb upstream 5.0kb upstream 5000 false scaffold00934: 889061-894060 Cucumis sativus
Cucsa.109980 5.0kb downstream 5.0kb downstream 24339 true scaffold00934: 864722-889060 Cucumis sativus
Cucsa.109980 5.0kb downstream 5.0kb downstream 5000 false scaffold00934: 864722-869721 Cucumis sativus
Cucsa.109980 10.0kb upstream 10.0kb upstream 29339 true scaffold00934: 869722-899060 Cucumis sativus
Cucsa.109980 10.0kb upstream 10.0kb upstream 10000 false scaffold00934: 889061-899060 Cucumis sativus
Cucsa.109980 10.0kb downstream 10.0kb downstream 29339 true scaffold00934: 859722-889060 Cucumis sativus
Cucsa.109980 10.0kb downstream 10.0kb downstream 10000 false scaffold00934: 859722-869721 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300926 5265 Fabidae View MSA
124050345 5270 Rosid View MSA
123740194 5271 Pentapetalae View MSA
122789167 5272 Eudicot View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain