Gene : Cucsa.053560 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  30
Name:  ? Cucsa.053560 Secondary Identifier:  ? PAC:16954329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.053560 0.5kb upstream 0.5kb upstream 1439 true scaffold00581: 569648-571086 Cucumis sativus
Cucsa.053560 0.5kb upstream 0.5kb upstream 500 false scaffold00581: 569648-570147 Cucumis sativus
Cucsa.053560 0.5kb downstream 0.5kb downstream 1439 true scaffold00581: 570148-571586 Cucumis sativus
Cucsa.053560 0.5kb downstream 0.5kb downstream 500 false scaffold00581: 571087-571586 Cucumis sativus
Cucsa.053560 1.0kb upstream 1.0kb upstream 1939 true scaffold00581: 569148-571086 Cucumis sativus
Cucsa.053560 1.0kb upstream 1.0kb upstream 1000 false scaffold00581: 569148-570147 Cucumis sativus
Cucsa.053560 1.0kb downstream 1.0kb downstream 1939 true scaffold00581: 570148-572086 Cucumis sativus
Cucsa.053560 1.0kb downstream 1.0kb downstream 1000 false scaffold00581: 571087-572086 Cucumis sativus
Cucsa.053560 2.0kb upstream 2.0kb upstream 2939 true scaffold00581: 568148-571086 Cucumis sativus
Cucsa.053560 2.0kb upstream 2.0kb upstream 2000 false scaffold00581: 568148-570147 Cucumis sativus
Cucsa.053560 2.0kb downstream 2.0kb downstream 2939 true scaffold00581: 570148-573086 Cucumis sativus
Cucsa.053560 2.0kb downstream 2.0kb downstream 2000 false scaffold00581: 571087-573086 Cucumis sativus
Cucsa.053560 5.0kb upstream 5.0kb upstream 5939 true scaffold00581: 565148-571086 Cucumis sativus
Cucsa.053560 5.0kb upstream 5.0kb upstream 5000 false scaffold00581: 565148-570147 Cucumis sativus
Cucsa.053560 5.0kb downstream 5.0kb downstream 5939 true scaffold00581: 570148-576086 Cucumis sativus
Cucsa.053560 5.0kb downstream 5.0kb downstream 5000 false scaffold00581: 571087-576086 Cucumis sativus
Cucsa.053560 10.0kb upstream 10.0kb upstream 10939 true scaffold00581: 560148-571086 Cucumis sativus
Cucsa.053560 10.0kb upstream 10.0kb upstream 10000 false scaffold00581: 560148-570147 Cucumis sativus
Cucsa.053560 10.0kb downstream 10.0kb downstream 10939 true scaffold00581: 570148-581086 Cucumis sativus
Cucsa.053560 10.0kb downstream 10.0kb downstream 10000 false scaffold00581: 571087-581086 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315295 5265 Fabidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain