Gene : Cucsa.055980 C. sativus v1.0
Defline:  (1 of 1) PTHR22298:SF31 - ENDOGLUCANASE 16 Genomic Order:  16
Name:  ? Cucsa.055980 Secondary Identifier:  ? PAC:16954477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.055980 0.5kb upstream 0.5kb upstream 2747 true scaffold00602: 157712-160458 Cucumis sativus
Cucsa.055980 0.5kb upstream 0.5kb upstream 500 false scaffold00602: 157712-158211 Cucumis sativus
Cucsa.055980 0.5kb downstream 0.5kb downstream 2747 true scaffold00602: 158212-160958 Cucumis sativus
Cucsa.055980 0.5kb downstream 0.5kb downstream 500 false scaffold00602: 160459-160958 Cucumis sativus
Cucsa.055980 1.0kb upstream 1.0kb upstream 3247 true scaffold00602: 157212-160458 Cucumis sativus
Cucsa.055980 1.0kb upstream 1.0kb upstream 1000 false scaffold00602: 157212-158211 Cucumis sativus
Cucsa.055980 1.0kb downstream 1.0kb downstream 3247 true scaffold00602: 158212-161458 Cucumis sativus
Cucsa.055980 1.0kb downstream 1.0kb downstream 1000 false scaffold00602: 160459-161458 Cucumis sativus
Cucsa.055980 2.0kb upstream 2.0kb upstream 4247 true scaffold00602: 156212-160458 Cucumis sativus
Cucsa.055980 2.0kb upstream 2.0kb upstream 2000 false scaffold00602: 156212-158211 Cucumis sativus
Cucsa.055980 2.0kb downstream 2.0kb downstream 4247 true scaffold00602: 158212-162458 Cucumis sativus
Cucsa.055980 2.0kb downstream 2.0kb downstream 2000 false scaffold00602: 160459-162458 Cucumis sativus
Cucsa.055980 5.0kb upstream 5.0kb upstream 7247 true scaffold00602: 153212-160458 Cucumis sativus
Cucsa.055980 5.0kb upstream 5.0kb upstream 5000 false scaffold00602: 153212-158211 Cucumis sativus
Cucsa.055980 5.0kb downstream 5.0kb downstream 7247 true scaffold00602: 158212-165458 Cucumis sativus
Cucsa.055980 5.0kb downstream 5.0kb downstream 5000 false scaffold00602: 160459-165458 Cucumis sativus
Cucsa.055980 10.0kb upstream 10.0kb upstream 12247 true scaffold00602: 148212-160458 Cucumis sativus
Cucsa.055980 10.0kb upstream 10.0kb upstream 10000 false scaffold00602: 148212-158211 Cucumis sativus
Cucsa.055980 10.0kb downstream 10.0kb downstream 12247 true scaffold00602: 158212-170458 Cucumis sativus
Cucsa.055980 10.0kb downstream 10.0kb downstream 10000 false scaffold00602: 160459-170458 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310898 5265 Fabidae View MSA
124063472 5270 Rosid View MSA
123746243 5271 Pentapetalae View MSA
122789344 5272 Eudicot View MSA
122042866 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain