Gene : Cucsa.050460 C. sativus v1.0
Defline:  (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  1
Name:  ? Cucsa.050460 Secondary Identifier:  ? PAC:16954102
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6890 Cucumis sativus pathologic  
Csativus PWY-6908 Cucumis sativus pathologic  
Csativus PWY-6910 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.050460 0.5kb upstream 0.5kb upstream 19590 true scaffold00555: 8872-28461 Cucumis sativus
Cucsa.050460 0.5kb upstream 0.5kb upstream 500 false scaffold00555: 27962-28461 Cucumis sativus
Cucsa.050460 0.5kb downstream 0.5kb downstream 19590 true scaffold00555: 8372-27961 Cucumis sativus
Cucsa.050460 0.5kb downstream 0.5kb downstream 500 false scaffold00555: 8372-8871 Cucumis sativus
Cucsa.050460 1.0kb upstream 1.0kb upstream 20090 true scaffold00555: 8872-28961 Cucumis sativus
Cucsa.050460 1.0kb upstream 1.0kb upstream 1000 false scaffold00555: 27962-28961 Cucumis sativus
Cucsa.050460 1.0kb downstream 1.0kb downstream 20090 true scaffold00555: 7872-27961 Cucumis sativus
Cucsa.050460 1.0kb downstream 1.0kb downstream 1000 false scaffold00555: 7872-8871 Cucumis sativus
Cucsa.050460 2.0kb upstream 2.0kb upstream 21090 true scaffold00555: 8872-29961 Cucumis sativus
Cucsa.050460 2.0kb upstream 2.0kb upstream 2000 false scaffold00555: 27962-29961 Cucumis sativus
Cucsa.050460 2.0kb downstream 2.0kb downstream 21090 true scaffold00555: 6872-27961 Cucumis sativus
Cucsa.050460 2.0kb downstream 2.0kb downstream 2000 false scaffold00555: 6872-8871 Cucumis sativus
Cucsa.050460 5.0kb upstream 5.0kb upstream 24090 true scaffold00555: 8872-32961 Cucumis sativus
Cucsa.050460 5.0kb upstream 5.0kb upstream 5000 false scaffold00555: 27962-32961 Cucumis sativus
Cucsa.050460 5.0kb downstream 5.0kb downstream 24090 true scaffold00555: 3872-27961 Cucumis sativus
Cucsa.050460 5.0kb downstream 5.0kb downstream 5000 false scaffold00555: 3872-8871 Cucumis sativus
Cucsa.050460 10.0kb upstream 10.0kb upstream 29090 true scaffold00555: 8872-37961 Cucumis sativus
Cucsa.050460 10.0kb upstream 10.0kb upstream 10000 false scaffold00555: 27962-37961 Cucumis sativus
Cucsa.050460 10.0kb downstream 10.0kb downstream 27961 true scaffold00555: 1-27961 Cucumis sativus
Cucsa.050460 10.0kb downstream 10.0kb downstream 8871 false scaffold00555: 1-8871 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309007 5265 Fabidae View MSA
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain