Gene : Cucsa.078360 C. sativus v1.0
Defline:  (1 of 1) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  49
Name:  ? Cucsa.078360 Secondary Identifier:  ? PAC:16956072
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PANTO-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.078360 0.5kb upstream 0.5kb upstream 5789 true scaffold00793: 706761-712549 Cucumis sativus
Cucsa.078360 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 706761-707260 Cucumis sativus
Cucsa.078360 0.5kb downstream 0.5kb downstream 5789 true scaffold00793: 707261-713049 Cucumis sativus
Cucsa.078360 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 712550-713049 Cucumis sativus
Cucsa.078360 1.0kb upstream 1.0kb upstream 6289 true scaffold00793: 706261-712549 Cucumis sativus
Cucsa.078360 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 706261-707260 Cucumis sativus
Cucsa.078360 1.0kb downstream 1.0kb downstream 6289 true scaffold00793: 707261-713549 Cucumis sativus
Cucsa.078360 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 712550-713549 Cucumis sativus
Cucsa.078360 2.0kb upstream 2.0kb upstream 7289 true scaffold00793: 705261-712549 Cucumis sativus
Cucsa.078360 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 705261-707260 Cucumis sativus
Cucsa.078360 2.0kb downstream 2.0kb downstream 7289 true scaffold00793: 707261-714549 Cucumis sativus
Cucsa.078360 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 712550-714549 Cucumis sativus
Cucsa.078360 5.0kb upstream 5.0kb upstream 10289 true scaffold00793: 702261-712549 Cucumis sativus
Cucsa.078360 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 702261-707260 Cucumis sativus
Cucsa.078360 5.0kb downstream 5.0kb downstream 10289 true scaffold00793: 707261-717549 Cucumis sativus
Cucsa.078360 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 712550-717549 Cucumis sativus
Cucsa.078360 10.0kb upstream 10.0kb upstream 15289 true scaffold00793: 697261-712549 Cucumis sativus
Cucsa.078360 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 697261-707260 Cucumis sativus
Cucsa.078360 10.0kb downstream 10.0kb downstream 15289 true scaffold00793: 707261-722549 Cucumis sativus
Cucsa.078360 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 712550-722549 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301613 5265 Fabidae View MSA
124063716 5270 Rosid View MSA
123736873 5271 Pentapetalae View MSA
122793216 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain