Gene : Cucsa.083470 C. sativus v1.0
Defline:  (1 of 1) PTHR11552//PTHR11552:SF14 - GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE Genomic Order:  41
Name:  ? Cucsa.083470 Secondary Identifier:  ? PAC:16956433
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-2724 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.083470 0.5kb upstream 0.5kb upstream 3538 true scaffold00858: 308055-311592 Cucumis sativus
Cucsa.083470 0.5kb upstream 0.5kb upstream 500 false scaffold00858: 311093-311592 Cucumis sativus
Cucsa.083470 0.5kb downstream 0.5kb downstream 3538 true scaffold00858: 307555-311092 Cucumis sativus
Cucsa.083470 0.5kb downstream 0.5kb downstream 500 false scaffold00858: 307555-308054 Cucumis sativus
Cucsa.083470 1.0kb upstream 1.0kb upstream 4038 true scaffold00858: 308055-312092 Cucumis sativus
Cucsa.083470 1.0kb upstream 1.0kb upstream 1000 false scaffold00858: 311093-312092 Cucumis sativus
Cucsa.083470 1.0kb downstream 1.0kb downstream 4038 true scaffold00858: 307055-311092 Cucumis sativus
Cucsa.083470 1.0kb downstream 1.0kb downstream 1000 false scaffold00858: 307055-308054 Cucumis sativus
Cucsa.083470 2.0kb upstream 2.0kb upstream 5038 true scaffold00858: 308055-313092 Cucumis sativus
Cucsa.083470 2.0kb upstream 2.0kb upstream 2000 false scaffold00858: 311093-313092 Cucumis sativus
Cucsa.083470 2.0kb downstream 2.0kb downstream 5038 true scaffold00858: 306055-311092 Cucumis sativus
Cucsa.083470 2.0kb downstream 2.0kb downstream 2000 false scaffold00858: 306055-308054 Cucumis sativus
Cucsa.083470 5.0kb upstream 5.0kb upstream 8038 true scaffold00858: 308055-316092 Cucumis sativus
Cucsa.083470 5.0kb upstream 5.0kb upstream 5000 false scaffold00858: 311093-316092 Cucumis sativus
Cucsa.083470 5.0kb downstream 5.0kb downstream 8038 true scaffold00858: 303055-311092 Cucumis sativus
Cucsa.083470 5.0kb downstream 5.0kb downstream 5000 false scaffold00858: 303055-308054 Cucumis sativus
Cucsa.083470 10.0kb upstream 10.0kb upstream 13038 true scaffold00858: 308055-321092 Cucumis sativus
Cucsa.083470 10.0kb upstream 10.0kb upstream 10000 false scaffold00858: 311093-321092 Cucumis sativus
Cucsa.083470 10.0kb downstream 10.0kb downstream 13038 true scaffold00858: 298055-311092 Cucumis sativus
Cucsa.083470 10.0kb downstream 10.0kb downstream 10000 false scaffold00858: 298055-308054 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602369 5273 Angiosperm Singleton cluster - no MSA
122232611 5265 Fabidae Singleton cluster - no MSA
123978844 5270 Rosid Singleton cluster - no MSA
123554521 5271 Pentapetalae Singleton cluster - no MSA
122589335 5272 Eudicot Singleton cluster - no MSA
120874660 5274 Embryophyte Singleton cluster - no MSA
122915551 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain