Gene : Cucsa.043560 C. sativus v1.0
Defline:  (1 of 1) PTHR11139:SF1 - TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN Genomic Order:  54
Name:  ? Cucsa.043560 Secondary Identifier:  ? PAC:16953071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.043560 0.5kb upstream 0.5kb upstream 23989 true scaffold00542: 314312-338300 Cucumis sativus
Cucsa.043560 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 314312-314811 Cucumis sativus
Cucsa.043560 0.5kb downstream 0.5kb downstream 23989 true scaffold00542: 314812-338800 Cucumis sativus
Cucsa.043560 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 338301-338800 Cucumis sativus
Cucsa.043560 1.0kb upstream 1.0kb upstream 24489 true scaffold00542: 313812-338300 Cucumis sativus
Cucsa.043560 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 313812-314811 Cucumis sativus
Cucsa.043560 1.0kb downstream 1.0kb downstream 24489 true scaffold00542: 314812-339300 Cucumis sativus
Cucsa.043560 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 338301-339300 Cucumis sativus
Cucsa.043560 2.0kb upstream 2.0kb upstream 25489 true scaffold00542: 312812-338300 Cucumis sativus
Cucsa.043560 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 312812-314811 Cucumis sativus
Cucsa.043560 2.0kb downstream 2.0kb downstream 25489 true scaffold00542: 314812-340300 Cucumis sativus
Cucsa.043560 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 338301-340300 Cucumis sativus
Cucsa.043560 5.0kb upstream 5.0kb upstream 28489 true scaffold00542: 309812-338300 Cucumis sativus
Cucsa.043560 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 309812-314811 Cucumis sativus
Cucsa.043560 5.0kb downstream 5.0kb downstream 28489 true scaffold00542: 314812-343300 Cucumis sativus
Cucsa.043560 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 338301-343300 Cucumis sativus
Cucsa.043560 10.0kb upstream 10.0kb upstream 33489 true scaffold00542: 304812-338300 Cucumis sativus
Cucsa.043560 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 304812-314811 Cucumis sativus
Cucsa.043560 10.0kb downstream 10.0kb downstream 33489 true scaffold00542: 314812-348300 Cucumis sativus
Cucsa.043560 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 338301-348300 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122300725 5265 Fabidae View MSA
124067016 5270 Rosid View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain