Gene : Bostr.22252s0318 B. stricta v1.2
Defline:  (1 of 1) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  318
Name:  ? Bostr.22252s0318 Secondary Identifier:  ? PAC:30659590
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6773 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0318 0.5kb upstream 0.5kb upstream 15920 true Scaffold22252: 1360308-1376227 Boechera stricta
Bostr.22252s0318 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1360308-1360807 Boechera stricta
Bostr.22252s0318 0.5kb downstream 0.5kb downstream 15920 true Scaffold22252: 1360808-1376727 Boechera stricta
Bostr.22252s0318 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1376228-1376727 Boechera stricta
Bostr.22252s0318 1.0kb upstream 1.0kb upstream 16420 true Scaffold22252: 1359808-1376227 Boechera stricta
Bostr.22252s0318 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1359808-1360807 Boechera stricta
Bostr.22252s0318 1.0kb downstream 1.0kb downstream 16420 true Scaffold22252: 1360808-1377227 Boechera stricta
Bostr.22252s0318 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1376228-1377227 Boechera stricta
Bostr.22252s0318 2.0kb upstream 2.0kb upstream 17420 true Scaffold22252: 1358808-1376227 Boechera stricta
Bostr.22252s0318 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1358808-1360807 Boechera stricta
Bostr.22252s0318 2.0kb downstream 2.0kb downstream 17420 true Scaffold22252: 1360808-1378227 Boechera stricta
Bostr.22252s0318 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1376228-1378227 Boechera stricta
Bostr.22252s0318 5.0kb upstream 5.0kb upstream 20420 true Scaffold22252: 1355808-1376227 Boechera stricta
Bostr.22252s0318 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1355808-1360807 Boechera stricta
Bostr.22252s0318 5.0kb downstream 5.0kb downstream 20420 true Scaffold22252: 1360808-1381227 Boechera stricta
Bostr.22252s0318 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1376228-1381227 Boechera stricta
Bostr.22252s0318 10.0kb upstream 10.0kb upstream 25420 true Scaffold22252: 1350808-1376227 Boechera stricta
Bostr.22252s0318 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1350808-1360807 Boechera stricta
Bostr.22252s0318 10.0kb downstream 10.0kb downstream 25420 true Scaffold22252: 1360808-1386227 Boechera stricta
Bostr.22252s0318 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1376228-1386227 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363875 5261 Brassicaceae View MSA
123830920 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain