Gene : Bostr.18473s0225 B. stricta v1.2
Defline:  (1 of 1) PTHR11089:SF43 - NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  225
Name:  ? Bostr.18473s0225 Secondary Identifier:  ? PAC:30666980
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6845 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0225 0.5kb upstream 0.5kb upstream 3604 true Scaffold18473: 1263156-1266759 Boechera stricta
Bostr.18473s0225 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 1263156-1263655 Boechera stricta
Bostr.18473s0225 0.5kb downstream 0.5kb downstream 3604 true Scaffold18473: 1263656-1267259 Boechera stricta
Bostr.18473s0225 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 1266760-1267259 Boechera stricta
Bostr.18473s0225 1.0kb upstream 1.0kb upstream 4104 true Scaffold18473: 1262656-1266759 Boechera stricta
Bostr.18473s0225 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 1262656-1263655 Boechera stricta
Bostr.18473s0225 1.0kb downstream 1.0kb downstream 4104 true Scaffold18473: 1263656-1267759 Boechera stricta
Bostr.18473s0225 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 1266760-1267759 Boechera stricta
Bostr.18473s0225 2.0kb upstream 2.0kb upstream 5104 true Scaffold18473: 1261656-1266759 Boechera stricta
Bostr.18473s0225 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 1261656-1263655 Boechera stricta
Bostr.18473s0225 2.0kb downstream 2.0kb downstream 5104 true Scaffold18473: 1263656-1268759 Boechera stricta
Bostr.18473s0225 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 1266760-1268759 Boechera stricta
Bostr.18473s0225 5.0kb upstream 5.0kb upstream 8104 true Scaffold18473: 1258656-1266759 Boechera stricta
Bostr.18473s0225 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 1258656-1263655 Boechera stricta
Bostr.18473s0225 5.0kb downstream 5.0kb downstream 8104 true Scaffold18473: 1263656-1271759 Boechera stricta
Bostr.18473s0225 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 1266760-1271759 Boechera stricta
Bostr.18473s0225 10.0kb upstream 10.0kb upstream 13104 true Scaffold18473: 1253656-1266759 Boechera stricta
Bostr.18473s0225 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 1253656-1263655 Boechera stricta
Bostr.18473s0225 10.0kb downstream 10.0kb downstream 13104 true Scaffold18473: 1263656-1276759 Boechera stricta
Bostr.18473s0225 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 1266760-1276759 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374132 5261 Brassicaceae View MSA
123833305 5264 Brassicales-Malvales View MSA
124342471 5266 SBM View MSA
124243451 5268 Malvidae View MSA
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain