Gene : Bostr.12659s0422 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  422
Name:  ? Bostr.12659s0422 Secondary Identifier:  ? PAC:30652343
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0422 0.5kb upstream 0.5kb upstream 5841 true Scaffold12659: 2280114-2285954 Boechera stricta
Bostr.12659s0422 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 2280114-2280613 Boechera stricta
Bostr.12659s0422 0.5kb downstream 0.5kb downstream 5841 true Scaffold12659: 2280614-2286454 Boechera stricta
Bostr.12659s0422 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 2285955-2286454 Boechera stricta
Bostr.12659s0422 1.0kb upstream 1.0kb upstream 6341 true Scaffold12659: 2279614-2285954 Boechera stricta
Bostr.12659s0422 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 2279614-2280613 Boechera stricta
Bostr.12659s0422 1.0kb downstream 1.0kb downstream 6341 true Scaffold12659: 2280614-2286954 Boechera stricta
Bostr.12659s0422 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 2285955-2286954 Boechera stricta
Bostr.12659s0422 2.0kb upstream 2.0kb upstream 7341 true Scaffold12659: 2278614-2285954 Boechera stricta
Bostr.12659s0422 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 2278614-2280613 Boechera stricta
Bostr.12659s0422 2.0kb downstream 2.0kb downstream 7341 true Scaffold12659: 2280614-2287954 Boechera stricta
Bostr.12659s0422 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 2285955-2287954 Boechera stricta
Bostr.12659s0422 5.0kb upstream 5.0kb upstream 10341 true Scaffold12659: 2275614-2285954 Boechera stricta
Bostr.12659s0422 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 2275614-2280613 Boechera stricta
Bostr.12659s0422 5.0kb downstream 5.0kb downstream 10341 true Scaffold12659: 2280614-2290954 Boechera stricta
Bostr.12659s0422 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 2285955-2290954 Boechera stricta
Bostr.12659s0422 10.0kb upstream 10.0kb upstream 15341 true Scaffold12659: 2270614-2285954 Boechera stricta
Bostr.12659s0422 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 2270614-2280613 Boechera stricta
Bostr.12659s0422 10.0kb downstream 10.0kb downstream 15341 true Scaffold12659: 2280614-2295954 Boechera stricta
Bostr.12659s0422 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 2285955-2295954 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain