Gene : Bostr.7867s0472 B. stricta v1.2
Defline:  (1 of 1) PF06414//PF14681 - Zeta toxin (Zeta_toxin) // Uracil phosphoribosyltransferase (UPRTase) Genomic Order:  472
Name:  ? Bostr.7867s0472 Secondary Identifier:  ? PAC:30657696
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7183 Boechera stricta pathologic  
Bstricta PWY-7193 Boechera stricta pathologic  
Bstricta PWY-7196 Boechera stricta pathologic  
Bstricta PWY-7208 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0472 0.5kb upstream 0.5kb upstream 4985 true Scaffold7867: 2384142-2389126 Boechera stricta
Bostr.7867s0472 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 2384142-2384641 Boechera stricta
Bostr.7867s0472 0.5kb downstream 0.5kb downstream 4985 true Scaffold7867: 2384642-2389626 Boechera stricta
Bostr.7867s0472 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 2389127-2389626 Boechera stricta
Bostr.7867s0472 1.0kb upstream 1.0kb upstream 5485 true Scaffold7867: 2383642-2389126 Boechera stricta
Bostr.7867s0472 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 2383642-2384641 Boechera stricta
Bostr.7867s0472 1.0kb downstream 1.0kb downstream 5485 true Scaffold7867: 2384642-2390126 Boechera stricta
Bostr.7867s0472 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 2389127-2390126 Boechera stricta
Bostr.7867s0472 2.0kb upstream 2.0kb upstream 6485 true Scaffold7867: 2382642-2389126 Boechera stricta
Bostr.7867s0472 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 2382642-2384641 Boechera stricta
Bostr.7867s0472 2.0kb downstream 2.0kb downstream 6485 true Scaffold7867: 2384642-2391126 Boechera stricta
Bostr.7867s0472 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 2389127-2391126 Boechera stricta
Bostr.7867s0472 5.0kb upstream 5.0kb upstream 9485 true Scaffold7867: 2379642-2389126 Boechera stricta
Bostr.7867s0472 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 2379642-2384641 Boechera stricta
Bostr.7867s0472 5.0kb downstream 5.0kb downstream 9485 true Scaffold7867: 2384642-2394126 Boechera stricta
Bostr.7867s0472 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 2389127-2394126 Boechera stricta
Bostr.7867s0472 10.0kb upstream 10.0kb upstream 14485 true Scaffold7867: 2374642-2389126 Boechera stricta
Bostr.7867s0472 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 2374642-2384641 Boechera stricta
Bostr.7867s0472 10.0kb downstream 10.0kb downstream 14485 true Scaffold7867: 2384642-2399126 Boechera stricta
Bostr.7867s0472 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 2389127-2399126 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041091 5273 Angiosperm View MSA
122371435 5261 Brassicaceae View MSA
123839716 5264 Brassicales-Malvales View MSA
124345473 5266 SBM View MSA
124239714 5268 Malvidae View MSA
124065001 5270 Rosid View MSA
123740268 5271 Pentapetalae View MSA
122797496 5272 Eudicot View MSA
121350509 5274 Embryophyte View MSA
123428213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain