Gene : Bostr.2570s0296 B. stricta v1.2
Defline:  (1 of 2) PTHR10836:SF53 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC2, CYTOSOLIC Genomic Order:  296
Name:  ? Bostr.2570s0296 Secondary Identifier:  ? PAC:30666693
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ANAEROFRUCAT-PWY Boechera stricta pathologic  
Bstricta ANAGLYCOLYSIS-PWY Boechera stricta pathologic  
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta PWY-1042 Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY66-399 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2570s0296 0.5kb upstream 0.5kb upstream 2961 true Scaffold2570: 1415644-1418604 Boechera stricta
Bostr.2570s0296 0.5kb upstream 0.5kb upstream 500 false Scaffold2570: 1418105-1418604 Boechera stricta
Bostr.2570s0296 0.5kb downstream 0.5kb downstream 2961 true Scaffold2570: 1415144-1418104 Boechera stricta
Bostr.2570s0296 0.5kb downstream 0.5kb downstream 500 false Scaffold2570: 1415144-1415643 Boechera stricta
Bostr.2570s0296 1.0kb upstream 1.0kb upstream 3461 true Scaffold2570: 1415644-1419104 Boechera stricta
Bostr.2570s0296 1.0kb upstream 1.0kb upstream 1000 false Scaffold2570: 1418105-1419104 Boechera stricta
Bostr.2570s0296 1.0kb downstream 1.0kb downstream 3461 true Scaffold2570: 1414644-1418104 Boechera stricta
Bostr.2570s0296 1.0kb downstream 1.0kb downstream 1000 false Scaffold2570: 1414644-1415643 Boechera stricta
Bostr.2570s0296 2.0kb upstream 2.0kb upstream 4461 true Scaffold2570: 1415644-1420104 Boechera stricta
Bostr.2570s0296 2.0kb upstream 2.0kb upstream 2000 false Scaffold2570: 1418105-1420104 Boechera stricta
Bostr.2570s0296 2.0kb downstream 2.0kb downstream 4461 true Scaffold2570: 1413644-1418104 Boechera stricta
Bostr.2570s0296 2.0kb downstream 2.0kb downstream 2000 false Scaffold2570: 1413644-1415643 Boechera stricta
Bostr.2570s0296 5.0kb upstream 5.0kb upstream 7461 true Scaffold2570: 1415644-1423104 Boechera stricta
Bostr.2570s0296 5.0kb upstream 5.0kb upstream 5000 false Scaffold2570: 1418105-1423104 Boechera stricta
Bostr.2570s0296 5.0kb downstream 5.0kb downstream 7461 true Scaffold2570: 1410644-1418104 Boechera stricta
Bostr.2570s0296 5.0kb downstream 5.0kb downstream 5000 false Scaffold2570: 1410644-1415643 Boechera stricta
Bostr.2570s0296 10.0kb upstream 10.0kb upstream 12461 true Scaffold2570: 1415644-1428104 Boechera stricta
Bostr.2570s0296 10.0kb upstream 10.0kb upstream 10000 false Scaffold2570: 1418105-1428104 Boechera stricta
Bostr.2570s0296 10.0kb downstream 10.0kb downstream 12461 true Scaffold2570: 1405644-1418104 Boechera stricta
Bostr.2570s0296 10.0kb downstream 10.0kb downstream 10000 false Scaffold2570: 1405644-1415643 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381041 5261 Brassicaceae View MSA
123840158 5264 Brassicales-Malvales View MSA
124346732 5266 SBM View MSA
124250703 5268 Malvidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain