Gene : Bostr.0556s0005 B. stricta v1.2

Defline:  (1 of 1) PTHR31065:SF15 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  5
Name:  ? Bostr.0556s0005 Secondary Identifier:  ? PAC:30664206

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0005 0.5kb upstream 0.5kb upstream 2844 true Scaffold556: 30873-33716 Boechera stricta
Bostr.0556s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 33217-33716 Boechera stricta
Bostr.0556s0005 0.5kb downstream 0.5kb downstream 2844 true Scaffold556: 30373-33216 Boechera stricta
Bostr.0556s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 30373-30872 Boechera stricta
Bostr.0556s0005 1.0kb upstream 1.0kb upstream 3344 true Scaffold556: 30873-34216 Boechera stricta
Bostr.0556s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 33217-34216 Boechera stricta
Bostr.0556s0005 1.0kb downstream 1.0kb downstream 3344 true Scaffold556: 29873-33216 Boechera stricta
Bostr.0556s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 29873-30872 Boechera stricta
Bostr.0556s0005 2.0kb upstream 2.0kb upstream 4344 true Scaffold556: 30873-35216 Boechera stricta
Bostr.0556s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 33217-35216 Boechera stricta
Bostr.0556s0005 2.0kb downstream 2.0kb downstream 4344 true Scaffold556: 28873-33216 Boechera stricta
Bostr.0556s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 28873-30872 Boechera stricta
Bostr.0556s0005 5.0kb upstream 5.0kb upstream 7344 true Scaffold556: 30873-38216 Boechera stricta
Bostr.0556s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 33217-38216 Boechera stricta
Bostr.0556s0005 5.0kb downstream 5.0kb downstream 7344 true Scaffold556: 25873-33216 Boechera stricta
Bostr.0556s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 25873-30872 Boechera stricta
Bostr.0556s0005 10.0kb upstream 10.0kb upstream 12344 true Scaffold556: 30873-43216 Boechera stricta
Bostr.0556s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 33217-43216 Boechera stricta
Bostr.0556s0005 10.0kb downstream 10.0kb downstream 12344 true Scaffold556: 20873-33216 Boechera stricta
Bostr.0556s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 20873-30872 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791790 5273 Angiosperm View MSA
122375116 5261 Brassicaceae View MSA
123841001 5264 Brassicales-Malvales View MSA
124345382 5266 SBM View MSA
124242373 5268 Malvidae View MSA
124061257 5270 Rosid View MSA
123743284 5271 Pentapetalae View MSA
122793533 5272 Eudicot View MSA
121063080 5274 Embryophyte View MSA
123102864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain