Gene : Bostr.5022s0031 B. stricta v1.2
Defline:  (1 of 57) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  31
Name:  ? Bostr.5022s0031 Secondary Identifier:  ? PAC:30666104
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.5022s0031 0.5kb upstream 0.5kb upstream 3666 true Scaffold5022: 256678-260343 Boechera stricta
Bostr.5022s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold5022: 259844-260343 Boechera stricta
Bostr.5022s0031 0.5kb downstream 0.5kb downstream 3666 true Scaffold5022: 256178-259843 Boechera stricta
Bostr.5022s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold5022: 256178-256677 Boechera stricta
Bostr.5022s0031 1.0kb upstream 1.0kb upstream 4166 true Scaffold5022: 256678-260843 Boechera stricta
Bostr.5022s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold5022: 259844-260843 Boechera stricta
Bostr.5022s0031 1.0kb downstream 1.0kb downstream 4166 true Scaffold5022: 255678-259843 Boechera stricta
Bostr.5022s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold5022: 255678-256677 Boechera stricta
Bostr.5022s0031 2.0kb upstream 2.0kb upstream 5166 true Scaffold5022: 256678-261843 Boechera stricta
Bostr.5022s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold5022: 259844-261843 Boechera stricta
Bostr.5022s0031 2.0kb downstream 2.0kb downstream 5166 true Scaffold5022: 254678-259843 Boechera stricta
Bostr.5022s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold5022: 254678-256677 Boechera stricta
Bostr.5022s0031 5.0kb upstream 5.0kb upstream 8166 true Scaffold5022: 256678-264843 Boechera stricta
Bostr.5022s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold5022: 259844-264843 Boechera stricta
Bostr.5022s0031 5.0kb downstream 5.0kb downstream 8166 true Scaffold5022: 251678-259843 Boechera stricta
Bostr.5022s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold5022: 251678-256677 Boechera stricta
Bostr.5022s0031 10.0kb upstream 10.0kb upstream 13166 true Scaffold5022: 256678-269843 Boechera stricta
Bostr.5022s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold5022: 259844-269843 Boechera stricta
Bostr.5022s0031 10.0kb downstream 10.0kb downstream 13166 true Scaffold5022: 246678-259843 Boechera stricta
Bostr.5022s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold5022: 246678-256677 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377899 5261 Brassicaceae View MSA
123831431 5264 Brassicales-Malvales View MSA
124341547 5266 SBM View MSA
124249925 5268 Malvidae View MSA
124067194 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain