Gene : Bostr.26833s0968 B. stricta v1.2
Defline:  (1 of 1) 2.5.1.16//2.5.1.22 - Spermidine synthase / Putrescine aminopropyltransferase // Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  968
Name:  ? Bostr.26833s0968 Secondary Identifier:  ? PAC:30652685
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSPECAT-PWY Boechera stricta pathologic  
Bstricta BSUBPOLYAMSYN-PWY Boechera stricta pathologic  
Bstricta PWY-7528 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0968 0.5kb upstream 0.5kb upstream 3891 true Scaffold26833: 5585459-5589349 Boechera stricta
Bostr.26833s0968 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 5588850-5589349 Boechera stricta
Bostr.26833s0968 0.5kb downstream 0.5kb downstream 3891 true Scaffold26833: 5584959-5588849 Boechera stricta
Bostr.26833s0968 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 5584959-5585458 Boechera stricta
Bostr.26833s0968 1.0kb upstream 1.0kb upstream 4391 true Scaffold26833: 5585459-5589849 Boechera stricta
Bostr.26833s0968 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 5588850-5589849 Boechera stricta
Bostr.26833s0968 1.0kb downstream 1.0kb downstream 4391 true Scaffold26833: 5584459-5588849 Boechera stricta
Bostr.26833s0968 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 5584459-5585458 Boechera stricta
Bostr.26833s0968 2.0kb upstream 2.0kb upstream 5391 true Scaffold26833: 5585459-5590849 Boechera stricta
Bostr.26833s0968 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 5588850-5590849 Boechera stricta
Bostr.26833s0968 2.0kb downstream 2.0kb downstream 5391 true Scaffold26833: 5583459-5588849 Boechera stricta
Bostr.26833s0968 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 5583459-5585458 Boechera stricta
Bostr.26833s0968 5.0kb upstream 5.0kb upstream 8391 true Scaffold26833: 5585459-5593849 Boechera stricta
Bostr.26833s0968 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 5588850-5593849 Boechera stricta
Bostr.26833s0968 5.0kb downstream 5.0kb downstream 8391 true Scaffold26833: 5580459-5588849 Boechera stricta
Bostr.26833s0968 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 5580459-5585458 Boechera stricta
Bostr.26833s0968 10.0kb upstream 10.0kb upstream 13391 true Scaffold26833: 5585459-5598849 Boechera stricta
Bostr.26833s0968 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 5588850-5598849 Boechera stricta
Bostr.26833s0968 10.0kb downstream 10.0kb downstream 13391 true Scaffold26833: 5575459-5588849 Boechera stricta
Bostr.26833s0968 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 5575459-5585458 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374357 5261 Brassicaceae View MSA
123829244 5264 Brassicales-Malvales View MSA
124341220 5266 SBM View MSA
124251479 5268 Malvidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain