Gene : Brara.F00129 B. rapa FPsc v1.3
Defline:  (1 of 12) 1.1.1.37 - Malate dehydrogenase / Malic dehydrogenase Genomic Order:  129
Name:  ? Brara.F00129 Secondary Identifier:  ? PAC:30628624
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYOXYLATE-BYPASS Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00129 0.5kb upstream 0.5kb upstream 2315 true A06: 806102-808416 Brassica rapa FPsc
Brara.F00129 0.5kb upstream 0.5kb upstream 500 false A06: 806102-806601 Brassica rapa FPsc
Brara.F00129 0.5kb downstream 0.5kb downstream 2315 true A06: 806602-808916 Brassica rapa FPsc
Brara.F00129 0.5kb downstream 0.5kb downstream 500 false A06: 808417-808916 Brassica rapa FPsc
Brara.F00129 1.0kb upstream 1.0kb upstream 2815 true A06: 805602-808416 Brassica rapa FPsc
Brara.F00129 1.0kb upstream 1.0kb upstream 1000 false A06: 805602-806601 Brassica rapa FPsc
Brara.F00129 1.0kb downstream 1.0kb downstream 2815 true A06: 806602-809416 Brassica rapa FPsc
Brara.F00129 1.0kb downstream 1.0kb downstream 1000 false A06: 808417-809416 Brassica rapa FPsc
Brara.F00129 2.0kb upstream 2.0kb upstream 3815 true A06: 804602-808416 Brassica rapa FPsc
Brara.F00129 2.0kb upstream 2.0kb upstream 2000 false A06: 804602-806601 Brassica rapa FPsc
Brara.F00129 2.0kb downstream 2.0kb downstream 3815 true A06: 806602-810416 Brassica rapa FPsc
Brara.F00129 2.0kb downstream 2.0kb downstream 2000 false A06: 808417-810416 Brassica rapa FPsc
Brara.F00129 5.0kb upstream 5.0kb upstream 6815 true A06: 801602-808416 Brassica rapa FPsc
Brara.F00129 5.0kb upstream 5.0kb upstream 5000 false A06: 801602-806601 Brassica rapa FPsc
Brara.F00129 5.0kb downstream 5.0kb downstream 6815 true A06: 806602-813416 Brassica rapa FPsc
Brara.F00129 5.0kb downstream 5.0kb downstream 5000 false A06: 808417-813416 Brassica rapa FPsc
Brara.F00129 10.0kb upstream 10.0kb upstream 11815 true A06: 796602-808416 Brassica rapa FPsc
Brara.F00129 10.0kb upstream 10.0kb upstream 10000 false A06: 796602-806601 Brassica rapa FPsc
Brara.F00129 10.0kb downstream 10.0kb downstream 11815 true A06: 806602-818416 Brassica rapa FPsc
Brara.F00129 10.0kb downstream 10.0kb downstream 10000 false A06: 808417-818416 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350325 5261 Brassicaceae Singleton cluster - no MSA
123840380 5264 Brassicales-Malvales View MSA
124342947 5266 SBM View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier