Gene : Brara.K00931 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21631:SF3 - BIFUNCTIONAL GLYOXYLATE CYCLE PROTEIN Genomic Order:  1
Name:  ? Brara.K00931 Secondary Identifier:  ? PAC:30623254
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYOXYLATE-BYPASS Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00931 0.5kb upstream 0.5kb upstream 1322 true Scaffold324: 1-1322 Brassica rapa FPsc
Brara.K00931 0.5kb upstream 0.5kb upstream 2 false Scaffold324: 1-2 Brassica rapa FPsc
Brara.K00931 0.5kb downstream 0.5kb downstream 1327 true Scaffold324: 3-1329 Brassica rapa FPsc
Brara.K00931 0.5kb downstream 0.5kb downstream 7 false Scaffold324: 1323-1329 Brassica rapa FPsc
Brara.K00931 1.0kb upstream 1.0kb upstream 1322 true Scaffold324: 1-1322 Brassica rapa FPsc
Brara.K00931 1.0kb upstream 1.0kb upstream 2 false Scaffold324: 1-2 Brassica rapa FPsc
Brara.K00931 1.0kb downstream 1.0kb downstream 1327 true Scaffold324: 3-1329 Brassica rapa FPsc
Brara.K00931 1.0kb downstream 1.0kb downstream 7 false Scaffold324: 1323-1329 Brassica rapa FPsc
Brara.K00931 2.0kb upstream 2.0kb upstream 1322 true Scaffold324: 1-1322 Brassica rapa FPsc
Brara.K00931 2.0kb upstream 2.0kb upstream 2 false Scaffold324: 1-2 Brassica rapa FPsc
Brara.K00931 2.0kb downstream 2.0kb downstream 1327 true Scaffold324: 3-1329 Brassica rapa FPsc
Brara.K00931 2.0kb downstream 2.0kb downstream 7 false Scaffold324: 1323-1329 Brassica rapa FPsc
Brara.K00931 5.0kb upstream 5.0kb upstream 1322 true Scaffold324: 1-1322 Brassica rapa FPsc
Brara.K00931 5.0kb upstream 5.0kb upstream 2 false Scaffold324: 1-2 Brassica rapa FPsc
Brara.K00931 5.0kb downstream 5.0kb downstream 1327 true Scaffold324: 3-1329 Brassica rapa FPsc
Brara.K00931 5.0kb downstream 5.0kb downstream 7 false Scaffold324: 1323-1329 Brassica rapa FPsc
Brara.K00931 10.0kb upstream 10.0kb upstream 1322 true Scaffold324: 1-1322 Brassica rapa FPsc
Brara.K00931 10.0kb upstream 10.0kb upstream 2 false Scaffold324: 1-2 Brassica rapa FPsc
Brara.K00931 10.0kb downstream 10.0kb downstream 1327 true Scaffold324: 3-1329 Brassica rapa FPsc
Brara.K00931 10.0kb downstream 10.0kb downstream 7 false Scaffold324: 1323-1329 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121504991 5273 Angiosperm Singleton cluster - no MSA
122349067 5261 Brassicaceae Singleton cluster - no MSA
123788312 5264 Brassicales-Malvales Singleton cluster - no MSA
124286346 5266 SBM Singleton cluster - no MSA
124140235 5268 Malvidae Singleton cluster - no MSA
123867491 5270 Rosid Singleton cluster - no MSA
123452339 5271 Pentapetalae Singleton cluster - no MSA
122487827 5272 Eudicot Singleton cluster - no MSA
120778219 5274 Embryophyte Singleton cluster - no MSA
123428552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier