Gene : Brara.E02768 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22594:SF20 - LYSINE--TRNA LIGASE Genomic Order:  2768
Name:  ? Brara.E02768 Secondary Identifier:  ? PAC:30623476
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02768 0.5kb upstream 0.5kb upstream 3890 true A05: 23973210-23977099 Brassica rapa FPsc
Brara.E02768 0.5kb upstream 0.5kb upstream 500 false A05: 23973210-23973709 Brassica rapa FPsc
Brara.E02768 0.5kb downstream 0.5kb downstream 3890 true A05: 23973710-23977599 Brassica rapa FPsc
Brara.E02768 0.5kb downstream 0.5kb downstream 500 false A05: 23977100-23977599 Brassica rapa FPsc
Brara.E02768 1.0kb upstream 1.0kb upstream 4390 true A05: 23972710-23977099 Brassica rapa FPsc
Brara.E02768 1.0kb upstream 1.0kb upstream 1000 false A05: 23972710-23973709 Brassica rapa FPsc
Brara.E02768 1.0kb downstream 1.0kb downstream 4390 true A05: 23973710-23978099 Brassica rapa FPsc
Brara.E02768 1.0kb downstream 1.0kb downstream 1000 false A05: 23977100-23978099 Brassica rapa FPsc
Brara.E02768 2.0kb upstream 2.0kb upstream 5390 true A05: 23971710-23977099 Brassica rapa FPsc
Brara.E02768 2.0kb upstream 2.0kb upstream 2000 false A05: 23971710-23973709 Brassica rapa FPsc
Brara.E02768 2.0kb downstream 2.0kb downstream 5390 true A05: 23973710-23979099 Brassica rapa FPsc
Brara.E02768 2.0kb downstream 2.0kb downstream 2000 false A05: 23977100-23979099 Brassica rapa FPsc
Brara.E02768 5.0kb upstream 5.0kb upstream 8390 true A05: 23968710-23977099 Brassica rapa FPsc
Brara.E02768 5.0kb upstream 5.0kb upstream 5000 false A05: 23968710-23973709 Brassica rapa FPsc
Brara.E02768 5.0kb downstream 5.0kb downstream 8390 true A05: 23973710-23982099 Brassica rapa FPsc
Brara.E02768 5.0kb downstream 5.0kb downstream 5000 false A05: 23977100-23982099 Brassica rapa FPsc
Brara.E02768 10.0kb upstream 10.0kb upstream 13390 true A05: 23963710-23977099 Brassica rapa FPsc
Brara.E02768 10.0kb upstream 10.0kb upstream 10000 false A05: 23963710-23973709 Brassica rapa FPsc
Brara.E02768 10.0kb downstream 10.0kb downstream 13390 true A05: 23973710-23987099 Brassica rapa FPsc
Brara.E02768 10.0kb downstream 10.0kb downstream 10000 false A05: 23977100-23987099 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363133 5261 Brassicaceae View MSA
123829318 5264 Brassicales-Malvales View MSA
124344689 5266 SBM View MSA
124239048 5268 Malvidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier