Gene : Brara.E02379 B. rapa FPsc v1.3
Defline:  (1 of 35) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2379
Name:  ? Brara.E02379 Secondary Identifier:  ? PAC:30626739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02379 0.5kb upstream 0.5kb upstream 7155 true A05: 21457953-21465107 Brassica rapa FPsc
Brara.E02379 0.5kb upstream 0.5kb upstream 500 false A05: 21457953-21458452 Brassica rapa FPsc
Brara.E02379 0.5kb downstream 0.5kb downstream 7155 true A05: 21458453-21465607 Brassica rapa FPsc
Brara.E02379 0.5kb downstream 0.5kb downstream 500 false A05: 21465108-21465607 Brassica rapa FPsc
Brara.E02379 1.0kb upstream 1.0kb upstream 7655 true A05: 21457453-21465107 Brassica rapa FPsc
Brara.E02379 1.0kb upstream 1.0kb upstream 1000 false A05: 21457453-21458452 Brassica rapa FPsc
Brara.E02379 1.0kb downstream 1.0kb downstream 7655 true A05: 21458453-21466107 Brassica rapa FPsc
Brara.E02379 1.0kb downstream 1.0kb downstream 1000 false A05: 21465108-21466107 Brassica rapa FPsc
Brara.E02379 2.0kb upstream 2.0kb upstream 8655 true A05: 21456453-21465107 Brassica rapa FPsc
Brara.E02379 2.0kb upstream 2.0kb upstream 2000 false A05: 21456453-21458452 Brassica rapa FPsc
Brara.E02379 2.0kb downstream 2.0kb downstream 8655 true A05: 21458453-21467107 Brassica rapa FPsc
Brara.E02379 2.0kb downstream 2.0kb downstream 2000 false A05: 21465108-21467107 Brassica rapa FPsc
Brara.E02379 5.0kb upstream 5.0kb upstream 11655 true A05: 21453453-21465107 Brassica rapa FPsc
Brara.E02379 5.0kb upstream 5.0kb upstream 5000 false A05: 21453453-21458452 Brassica rapa FPsc
Brara.E02379 5.0kb downstream 5.0kb downstream 11655 true A05: 21458453-21470107 Brassica rapa FPsc
Brara.E02379 5.0kb downstream 5.0kb downstream 5000 false A05: 21465108-21470107 Brassica rapa FPsc
Brara.E02379 10.0kb upstream 10.0kb upstream 16655 true A05: 21448453-21465107 Brassica rapa FPsc
Brara.E02379 10.0kb upstream 10.0kb upstream 10000 false A05: 21448453-21458452 Brassica rapa FPsc
Brara.E02379 10.0kb downstream 10.0kb downstream 16655 true A05: 21458453-21475107 Brassica rapa FPsc
Brara.E02379 10.0kb downstream 10.0kb downstream 10000 false A05: 21465108-21475107 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362627 5261 Brassicaceae View MSA
123833122 5264 Brassicales-Malvales View MSA
124342867 5266 SBM View MSA
124238327 5268 Malvidae View MSA
124064503 5270 Rosid View MSA
123744976 5271 Pentapetalae View MSA
122788115 5272 Eudicot View MSA
122047160 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350621 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier