Gene : Brara.E01933 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  1933
Name:  ? Brara.E01933 Secondary Identifier:  ? PAC:30627321
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6358 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6363 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6364 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01933 0.5kb upstream 0.5kb upstream 3243 true A05: 17388993-17392235 Brassica rapa FPsc
Brara.E01933 0.5kb upstream 0.5kb upstream 500 false A05: 17391736-17392235 Brassica rapa FPsc
Brara.E01933 0.5kb downstream 0.5kb downstream 3243 true A05: 17388493-17391735 Brassica rapa FPsc
Brara.E01933 0.5kb downstream 0.5kb downstream 500 false A05: 17388493-17388992 Brassica rapa FPsc
Brara.E01933 1.0kb upstream 1.0kb upstream 3743 true A05: 17388993-17392735 Brassica rapa FPsc
Brara.E01933 1.0kb upstream 1.0kb upstream 1000 false A05: 17391736-17392735 Brassica rapa FPsc
Brara.E01933 1.0kb downstream 1.0kb downstream 3743 true A05: 17387993-17391735 Brassica rapa FPsc
Brara.E01933 1.0kb downstream 1.0kb downstream 1000 false A05: 17387993-17388992 Brassica rapa FPsc
Brara.E01933 2.0kb upstream 2.0kb upstream 4743 true A05: 17388993-17393735 Brassica rapa FPsc
Brara.E01933 2.0kb upstream 2.0kb upstream 2000 false A05: 17391736-17393735 Brassica rapa FPsc
Brara.E01933 2.0kb downstream 2.0kb downstream 4743 true A05: 17386993-17391735 Brassica rapa FPsc
Brara.E01933 2.0kb downstream 2.0kb downstream 2000 false A05: 17386993-17388992 Brassica rapa FPsc
Brara.E01933 5.0kb upstream 5.0kb upstream 7743 true A05: 17388993-17396735 Brassica rapa FPsc
Brara.E01933 5.0kb upstream 5.0kb upstream 5000 false A05: 17391736-17396735 Brassica rapa FPsc
Brara.E01933 5.0kb downstream 5.0kb downstream 7743 true A05: 17383993-17391735 Brassica rapa FPsc
Brara.E01933 5.0kb downstream 5.0kb downstream 5000 false A05: 17383993-17388992 Brassica rapa FPsc
Brara.E01933 10.0kb upstream 10.0kb upstream 12743 true A05: 17388993-17401735 Brassica rapa FPsc
Brara.E01933 10.0kb upstream 10.0kb upstream 10000 false A05: 17391736-17401735 Brassica rapa FPsc
Brara.E01933 10.0kb downstream 10.0kb downstream 12743 true A05: 17378993-17391735 Brassica rapa FPsc
Brara.E01933 10.0kb downstream 10.0kb downstream 10000 false A05: 17378993-17388992 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365791 5261 Brassicaceae View MSA
123799037 5264 Brassicales-Malvales View MSA
124296599 5266 SBM View MSA
124148703 5268 Malvidae View MSA
123874647 5270 Rosid View MSA
123743815 5271 Pentapetalae View MSA
122770778 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier