Gene : Brara.I03960 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11808:SF50 - CYSTATHIONINE BETA-LYASE Genomic Order:  3960
Name:  ? Brara.I03960 Secondary Identifier:  ? PAC:30640743
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-702 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03960 0.5kb upstream 0.5kb upstream 2335 true A09: 35961526-35963860 Brassica rapa FPsc
Brara.I03960 0.5kb upstream 0.5kb upstream 500 false A09: 35961526-35962025 Brassica rapa FPsc
Brara.I03960 0.5kb downstream 0.5kb downstream 2335 true A09: 35962026-35964360 Brassica rapa FPsc
Brara.I03960 0.5kb downstream 0.5kb downstream 500 false A09: 35963861-35964360 Brassica rapa FPsc
Brara.I03960 1.0kb upstream 1.0kb upstream 2835 true A09: 35961026-35963860 Brassica rapa FPsc
Brara.I03960 1.0kb upstream 1.0kb upstream 1000 false A09: 35961026-35962025 Brassica rapa FPsc
Brara.I03960 1.0kb downstream 1.0kb downstream 2835 true A09: 35962026-35964860 Brassica rapa FPsc
Brara.I03960 1.0kb downstream 1.0kb downstream 1000 false A09: 35963861-35964860 Brassica rapa FPsc
Brara.I03960 2.0kb upstream 2.0kb upstream 3835 true A09: 35960026-35963860 Brassica rapa FPsc
Brara.I03960 2.0kb upstream 2.0kb upstream 2000 false A09: 35960026-35962025 Brassica rapa FPsc
Brara.I03960 2.0kb downstream 2.0kb downstream 3835 true A09: 35962026-35965860 Brassica rapa FPsc
Brara.I03960 2.0kb downstream 2.0kb downstream 2000 false A09: 35963861-35965860 Brassica rapa FPsc
Brara.I03960 5.0kb upstream 5.0kb upstream 6835 true A09: 35957026-35963860 Brassica rapa FPsc
Brara.I03960 5.0kb upstream 5.0kb upstream 5000 false A09: 35957026-35962025 Brassica rapa FPsc
Brara.I03960 5.0kb downstream 5.0kb downstream 6835 true A09: 35962026-35968860 Brassica rapa FPsc
Brara.I03960 5.0kb downstream 5.0kb downstream 5000 false A09: 35963861-35968860 Brassica rapa FPsc
Brara.I03960 10.0kb upstream 10.0kb upstream 11835 true A09: 35952026-35963860 Brassica rapa FPsc
Brara.I03960 10.0kb upstream 10.0kb upstream 10000 false A09: 35952026-35962025 Brassica rapa FPsc
Brara.I03960 10.0kb downstream 10.0kb downstream 11835 true A09: 35962026-35973860 Brassica rapa FPsc
Brara.I03960 10.0kb downstream 10.0kb downstream 10000 false A09: 35963861-35973860 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
122353259 5261 Brassicaceae Singleton cluster - no MSA
123791872 5264 Brassicales-Malvales Singleton cluster - no MSA
124289773 5266 SBM Singleton cluster - no MSA
124143050 5268 Malvidae Singleton cluster - no MSA
124038891 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier