Gene : Brara.I03275 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  3275
Name:  ? Brara.I03275 Secondary Identifier:  ? PAC:30643628
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6890 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6908 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6910 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03275 0.5kb upstream 0.5kb upstream 2971 true A09: 31237719-31240689 Brassica rapa FPsc
Brara.I03275 0.5kb upstream 0.5kb upstream 500 false A09: 31240190-31240689 Brassica rapa FPsc
Brara.I03275 0.5kb downstream 0.5kb downstream 2971 true A09: 31237219-31240189 Brassica rapa FPsc
Brara.I03275 0.5kb downstream 0.5kb downstream 500 false A09: 31237219-31237718 Brassica rapa FPsc
Brara.I03275 1.0kb upstream 1.0kb upstream 3471 true A09: 31237719-31241189 Brassica rapa FPsc
Brara.I03275 1.0kb upstream 1.0kb upstream 1000 false A09: 31240190-31241189 Brassica rapa FPsc
Brara.I03275 1.0kb downstream 1.0kb downstream 3471 true A09: 31236719-31240189 Brassica rapa FPsc
Brara.I03275 1.0kb downstream 1.0kb downstream 1000 false A09: 31236719-31237718 Brassica rapa FPsc
Brara.I03275 2.0kb upstream 2.0kb upstream 4471 true A09: 31237719-31242189 Brassica rapa FPsc
Brara.I03275 2.0kb upstream 2.0kb upstream 2000 false A09: 31240190-31242189 Brassica rapa FPsc
Brara.I03275 2.0kb downstream 2.0kb downstream 4471 true A09: 31235719-31240189 Brassica rapa FPsc
Brara.I03275 2.0kb downstream 2.0kb downstream 2000 false A09: 31235719-31237718 Brassica rapa FPsc
Brara.I03275 5.0kb upstream 5.0kb upstream 7471 true A09: 31237719-31245189 Brassica rapa FPsc
Brara.I03275 5.0kb upstream 5.0kb upstream 5000 false A09: 31240190-31245189 Brassica rapa FPsc
Brara.I03275 5.0kb downstream 5.0kb downstream 7471 true A09: 31232719-31240189 Brassica rapa FPsc
Brara.I03275 5.0kb downstream 5.0kb downstream 5000 false A09: 31232719-31237718 Brassica rapa FPsc
Brara.I03275 10.0kb upstream 10.0kb upstream 12471 true A09: 31237719-31250189 Brassica rapa FPsc
Brara.I03275 10.0kb upstream 10.0kb upstream 10000 false A09: 31240190-31250189 Brassica rapa FPsc
Brara.I03275 10.0kb downstream 10.0kb downstream 12471 true A09: 31227719-31240189 Brassica rapa FPsc
Brara.I03275 10.0kb downstream 10.0kb downstream 10000 false A09: 31227719-31237718 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361033 5261 Brassicaceae View MSA
123829578 5264 Brassicales-Malvales View MSA
124340765 5266 SBM View MSA
124237684 5268 Malvidae View MSA
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier