Gene : Brara.E00810 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  810
Name:  ? Brara.E00810 Secondary Identifier:  ? PAC:30625538
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6773 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00810 0.5kb upstream 0.5kb upstream 14707 true A05: 4688541-4703247 Brassica rapa FPsc
Brara.E00810 0.5kb upstream 0.5kb upstream 500 false A05: 4688541-4689040 Brassica rapa FPsc
Brara.E00810 0.5kb downstream 0.5kb downstream 14707 true A05: 4689041-4703747 Brassica rapa FPsc
Brara.E00810 0.5kb downstream 0.5kb downstream 500 false A05: 4703248-4703747 Brassica rapa FPsc
Brara.E00810 1.0kb upstream 1.0kb upstream 15207 true A05: 4688041-4703247 Brassica rapa FPsc
Brara.E00810 1.0kb upstream 1.0kb upstream 1000 false A05: 4688041-4689040 Brassica rapa FPsc
Brara.E00810 1.0kb downstream 1.0kb downstream 15207 true A05: 4689041-4704247 Brassica rapa FPsc
Brara.E00810 1.0kb downstream 1.0kb downstream 1000 false A05: 4703248-4704247 Brassica rapa FPsc
Brara.E00810 2.0kb upstream 2.0kb upstream 16207 true A05: 4687041-4703247 Brassica rapa FPsc
Brara.E00810 2.0kb upstream 2.0kb upstream 2000 false A05: 4687041-4689040 Brassica rapa FPsc
Brara.E00810 2.0kb downstream 2.0kb downstream 16207 true A05: 4689041-4705247 Brassica rapa FPsc
Brara.E00810 2.0kb downstream 2.0kb downstream 2000 false A05: 4703248-4705247 Brassica rapa FPsc
Brara.E00810 5.0kb upstream 5.0kb upstream 19207 true A05: 4684041-4703247 Brassica rapa FPsc
Brara.E00810 5.0kb upstream 5.0kb upstream 5000 false A05: 4684041-4689040 Brassica rapa FPsc
Brara.E00810 5.0kb downstream 5.0kb downstream 19207 true A05: 4689041-4708247 Brassica rapa FPsc
Brara.E00810 5.0kb downstream 5.0kb downstream 5000 false A05: 4703248-4708247 Brassica rapa FPsc
Brara.E00810 10.0kb upstream 10.0kb upstream 24207 true A05: 4679041-4703247 Brassica rapa FPsc
Brara.E00810 10.0kb upstream 10.0kb upstream 10000 false A05: 4679041-4689040 Brassica rapa FPsc
Brara.E00810 10.0kb downstream 10.0kb downstream 24207 true A05: 4689041-4713247 Brassica rapa FPsc
Brara.E00810 10.0kb downstream 10.0kb downstream 10000 false A05: 4703248-4713247 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366913 5261 Brassicaceae View MSA
123828682 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier