Gene : Brara.B01956 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  1956
Name:  ? Brara.B01956 Secondary Identifier:  ? PAC:30607994
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6358 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6363 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6364 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01956 0.5kb upstream 0.5kb upstream 3634 true A02: 12029056-12032689 Brassica rapa FPsc
Brara.B01956 0.5kb upstream 0.5kb upstream 500 false A02: 12029056-12029555 Brassica rapa FPsc
Brara.B01956 0.5kb downstream 0.5kb downstream 3634 true A02: 12029556-12033189 Brassica rapa FPsc
Brara.B01956 0.5kb downstream 0.5kb downstream 500 false A02: 12032690-12033189 Brassica rapa FPsc
Brara.B01956 1.0kb upstream 1.0kb upstream 4134 true A02: 12028556-12032689 Brassica rapa FPsc
Brara.B01956 1.0kb upstream 1.0kb upstream 1000 false A02: 12028556-12029555 Brassica rapa FPsc
Brara.B01956 1.0kb downstream 1.0kb downstream 4134 true A02: 12029556-12033689 Brassica rapa FPsc
Brara.B01956 1.0kb downstream 1.0kb downstream 1000 false A02: 12032690-12033689 Brassica rapa FPsc
Brara.B01956 2.0kb upstream 2.0kb upstream 5134 true A02: 12027556-12032689 Brassica rapa FPsc
Brara.B01956 2.0kb upstream 2.0kb upstream 2000 false A02: 12027556-12029555 Brassica rapa FPsc
Brara.B01956 2.0kb downstream 2.0kb downstream 5134 true A02: 12029556-12034689 Brassica rapa FPsc
Brara.B01956 2.0kb downstream 2.0kb downstream 2000 false A02: 12032690-12034689 Brassica rapa FPsc
Brara.B01956 5.0kb upstream 5.0kb upstream 8134 true A02: 12024556-12032689 Brassica rapa FPsc
Brara.B01956 5.0kb upstream 5.0kb upstream 5000 false A02: 12024556-12029555 Brassica rapa FPsc
Brara.B01956 5.0kb downstream 5.0kb downstream 8134 true A02: 12029556-12037689 Brassica rapa FPsc
Brara.B01956 5.0kb downstream 5.0kb downstream 5000 false A02: 12032690-12037689 Brassica rapa FPsc
Brara.B01956 10.0kb upstream 10.0kb upstream 13134 true A02: 12019556-12032689 Brassica rapa FPsc
Brara.B01956 10.0kb upstream 10.0kb upstream 10000 false A02: 12019556-12029555 Brassica rapa FPsc
Brara.B01956 10.0kb downstream 10.0kb downstream 13134 true A02: 12029556-12042689 Brassica rapa FPsc
Brara.B01956 10.0kb downstream 10.0kb downstream 10000 false A02: 12032690-12042689 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344842 5261 Brassicaceae Singleton cluster - no MSA
123784783 5264 Brassicales-Malvales Singleton cluster - no MSA
124282946 5266 SBM Singleton cluster - no MSA
124137440 5268 Malvidae Singleton cluster - no MSA
123865151 5270 Rosid Singleton cluster - no MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier