Gene : Brara.H02317 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  2317
Name:  ? Brara.H02317 Secondary Identifier:  ? PAC:30649449
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02317 0.5kb upstream 0.5kb upstream 5135 true A08: 19908624-19913758 Brassica rapa FPsc
Brara.H02317 0.5kb upstream 0.5kb upstream 500 false A08: 19913259-19913758 Brassica rapa FPsc
Brara.H02317 0.5kb downstream 0.5kb downstream 5135 true A08: 19908124-19913258 Brassica rapa FPsc
Brara.H02317 0.5kb downstream 0.5kb downstream 500 false A08: 19908124-19908623 Brassica rapa FPsc
Brara.H02317 1.0kb upstream 1.0kb upstream 5635 true A08: 19908624-19914258 Brassica rapa FPsc
Brara.H02317 1.0kb upstream 1.0kb upstream 1000 false A08: 19913259-19914258 Brassica rapa FPsc
Brara.H02317 1.0kb downstream 1.0kb downstream 5635 true A08: 19907624-19913258 Brassica rapa FPsc
Brara.H02317 1.0kb downstream 1.0kb downstream 1000 false A08: 19907624-19908623 Brassica rapa FPsc
Brara.H02317 2.0kb upstream 2.0kb upstream 6635 true A08: 19908624-19915258 Brassica rapa FPsc
Brara.H02317 2.0kb upstream 2.0kb upstream 2000 false A08: 19913259-19915258 Brassica rapa FPsc
Brara.H02317 2.0kb downstream 2.0kb downstream 6635 true A08: 19906624-19913258 Brassica rapa FPsc
Brara.H02317 2.0kb downstream 2.0kb downstream 2000 false A08: 19906624-19908623 Brassica rapa FPsc
Brara.H02317 5.0kb upstream 5.0kb upstream 9635 true A08: 19908624-19918258 Brassica rapa FPsc
Brara.H02317 5.0kb upstream 5.0kb upstream 5000 false A08: 19913259-19918258 Brassica rapa FPsc
Brara.H02317 5.0kb downstream 5.0kb downstream 9635 true A08: 19903624-19913258 Brassica rapa FPsc
Brara.H02317 5.0kb downstream 5.0kb downstream 5000 false A08: 19903624-19908623 Brassica rapa FPsc
Brara.H02317 10.0kb upstream 10.0kb upstream 14635 true A08: 19908624-19923258 Brassica rapa FPsc
Brara.H02317 10.0kb upstream 10.0kb upstream 10000 false A08: 19913259-19923258 Brassica rapa FPsc
Brara.H02317 10.0kb downstream 10.0kb downstream 14635 true A08: 19898624-19913258 Brassica rapa FPsc
Brara.H02317 10.0kb downstream 10.0kb downstream 10000 false A08: 19898624-19908623 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355517 5261 Brassicaceae Singleton cluster - no MSA
123793750 5264 Brassicales-Malvales Singleton cluster - no MSA
124291579 5266 SBM Singleton cluster - no MSA
124252000 5268 Malvidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier