Gene : Brara.H00467 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  467
Name:  ? Brara.H00467 Secondary Identifier:  ? PAC:30648511
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2724 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6054 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00467 0.5kb upstream 0.5kb upstream 3637 true A08: 4945107-4948743 Brassica rapa FPsc
Brara.H00467 0.5kb upstream 0.5kb upstream 500 false A08: 4948244-4948743 Brassica rapa FPsc
Brara.H00467 0.5kb downstream 0.5kb downstream 3637 true A08: 4944607-4948243 Brassica rapa FPsc
Brara.H00467 0.5kb downstream 0.5kb downstream 500 false A08: 4944607-4945106 Brassica rapa FPsc
Brara.H00467 1.0kb upstream 1.0kb upstream 4137 true A08: 4945107-4949243 Brassica rapa FPsc
Brara.H00467 1.0kb upstream 1.0kb upstream 1000 false A08: 4948244-4949243 Brassica rapa FPsc
Brara.H00467 1.0kb downstream 1.0kb downstream 4137 true A08: 4944107-4948243 Brassica rapa FPsc
Brara.H00467 1.0kb downstream 1.0kb downstream 1000 false A08: 4944107-4945106 Brassica rapa FPsc
Brara.H00467 2.0kb upstream 2.0kb upstream 5137 true A08: 4945107-4950243 Brassica rapa FPsc
Brara.H00467 2.0kb upstream 2.0kb upstream 2000 false A08: 4948244-4950243 Brassica rapa FPsc
Brara.H00467 2.0kb downstream 2.0kb downstream 5137 true A08: 4943107-4948243 Brassica rapa FPsc
Brara.H00467 2.0kb downstream 2.0kb downstream 2000 false A08: 4943107-4945106 Brassica rapa FPsc
Brara.H00467 5.0kb upstream 5.0kb upstream 8137 true A08: 4945107-4953243 Brassica rapa FPsc
Brara.H00467 5.0kb upstream 5.0kb upstream 5000 false A08: 4948244-4953243 Brassica rapa FPsc
Brara.H00467 5.0kb downstream 5.0kb downstream 8137 true A08: 4940107-4948243 Brassica rapa FPsc
Brara.H00467 5.0kb downstream 5.0kb downstream 5000 false A08: 4940107-4945106 Brassica rapa FPsc
Brara.H00467 10.0kb upstream 10.0kb upstream 13137 true A08: 4945107-4958243 Brassica rapa FPsc
Brara.H00467 10.0kb upstream 10.0kb upstream 10000 false A08: 4948244-4958243 Brassica rapa FPsc
Brara.H00467 10.0kb downstream 10.0kb downstream 13137 true A08: 4935107-4948243 Brassica rapa FPsc
Brara.H00467 10.0kb downstream 10.0kb downstream 10000 false A08: 4935107-4945106 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363292 5261 Brassicaceae View MSA
123836527 5264 Brassicales-Malvales View MSA
124343189 5266 SBM View MSA
124240388 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier