Gene : Brara.G02597 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10145 - TRANSCRIPTION ELONGATION FACTOR SPT6 Genomic Order:  2597
Name:  ? Brara.G02597 Secondary Identifier:  ? PAC:30632980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02597 0.5kb upstream 0.5kb upstream 7510 true A07: 21422882-21430391 Brassica rapa FPsc
Brara.G02597 0.5kb upstream 0.5kb upstream 500 false A07: 21429892-21430391 Brassica rapa FPsc
Brara.G02597 0.5kb downstream 0.5kb downstream 7510 true A07: 21422382-21429891 Brassica rapa FPsc
Brara.G02597 0.5kb downstream 0.5kb downstream 500 false A07: 21422382-21422881 Brassica rapa FPsc
Brara.G02597 1.0kb upstream 1.0kb upstream 8010 true A07: 21422882-21430891 Brassica rapa FPsc
Brara.G02597 1.0kb upstream 1.0kb upstream 1000 false A07: 21429892-21430891 Brassica rapa FPsc
Brara.G02597 1.0kb downstream 1.0kb downstream 8010 true A07: 21421882-21429891 Brassica rapa FPsc
Brara.G02597 1.0kb downstream 1.0kb downstream 1000 false A07: 21421882-21422881 Brassica rapa FPsc
Brara.G02597 2.0kb upstream 2.0kb upstream 9010 true A07: 21422882-21431891 Brassica rapa FPsc
Brara.G02597 2.0kb upstream 2.0kb upstream 2000 false A07: 21429892-21431891 Brassica rapa FPsc
Brara.G02597 2.0kb downstream 2.0kb downstream 9010 true A07: 21420882-21429891 Brassica rapa FPsc
Brara.G02597 2.0kb downstream 2.0kb downstream 2000 false A07: 21420882-21422881 Brassica rapa FPsc
Brara.G02597 5.0kb upstream 5.0kb upstream 12010 true A07: 21422882-21434891 Brassica rapa FPsc
Brara.G02597 5.0kb upstream 5.0kb upstream 5000 false A07: 21429892-21434891 Brassica rapa FPsc
Brara.G02597 5.0kb downstream 5.0kb downstream 12010 true A07: 21417882-21429891 Brassica rapa FPsc
Brara.G02597 5.0kb downstream 5.0kb downstream 5000 false A07: 21417882-21422881 Brassica rapa FPsc
Brara.G02597 10.0kb upstream 10.0kb upstream 17010 true A07: 21422882-21439891 Brassica rapa FPsc
Brara.G02597 10.0kb upstream 10.0kb upstream 10000 false A07: 21429892-21439891 Brassica rapa FPsc
Brara.G02597 10.0kb downstream 10.0kb downstream 17010 true A07: 21412882-21429891 Brassica rapa FPsc
Brara.G02597 10.0kb downstream 10.0kb downstream 10000 false A07: 21412882-21422881 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360860 5261 Brassicaceae View MSA
123837242 5264 Brassicales-Malvales View MSA
124344276 5266 SBM View MSA
124242204 5268 Malvidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier