Gene : Brara.F03890 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31832:SF5 - B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN Genomic Order:  3890
Name:  ? Brara.F03890 Secondary Identifier:  ? PAC:30627974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03890 0.5kb upstream 0.5kb upstream 2293 true A06: 29151806-29154098 Brassica rapa FPsc
Brara.F03890 0.5kb upstream 0.5kb upstream 500 false A06: 29153599-29154098 Brassica rapa FPsc
Brara.F03890 0.5kb downstream 0.5kb downstream 2293 true A06: 29151306-29153598 Brassica rapa FPsc
Brara.F03890 0.5kb downstream 0.5kb downstream 500 false A06: 29151306-29151805 Brassica rapa FPsc
Brara.F03890 1.0kb upstream 1.0kb upstream 2793 true A06: 29151806-29154598 Brassica rapa FPsc
Brara.F03890 1.0kb upstream 1.0kb upstream 1000 false A06: 29153599-29154598 Brassica rapa FPsc
Brara.F03890 1.0kb downstream 1.0kb downstream 2793 true A06: 29150806-29153598 Brassica rapa FPsc
Brara.F03890 1.0kb downstream 1.0kb downstream 1000 false A06: 29150806-29151805 Brassica rapa FPsc
Brara.F03890 2.0kb upstream 2.0kb upstream 3793 true A06: 29151806-29155598 Brassica rapa FPsc
Brara.F03890 2.0kb upstream 2.0kb upstream 2000 false A06: 29153599-29155598 Brassica rapa FPsc
Brara.F03890 2.0kb downstream 2.0kb downstream 3793 true A06: 29149806-29153598 Brassica rapa FPsc
Brara.F03890 2.0kb downstream 2.0kb downstream 2000 false A06: 29149806-29151805 Brassica rapa FPsc
Brara.F03890 5.0kb upstream 5.0kb upstream 6793 true A06: 29151806-29158598 Brassica rapa FPsc
Brara.F03890 5.0kb upstream 5.0kb upstream 5000 false A06: 29153599-29158598 Brassica rapa FPsc
Brara.F03890 5.0kb downstream 5.0kb downstream 6793 true A06: 29146806-29153598 Brassica rapa FPsc
Brara.F03890 5.0kb downstream 5.0kb downstream 5000 false A06: 29146806-29151805 Brassica rapa FPsc
Brara.F03890 10.0kb upstream 10.0kb upstream 11793 true A06: 29151806-29163598 Brassica rapa FPsc
Brara.F03890 10.0kb upstream 10.0kb upstream 10000 false A06: 29153599-29163598 Brassica rapa FPsc
Brara.F03890 10.0kb downstream 10.0kb downstream 11793 true A06: 29141806-29153598 Brassica rapa FPsc
Brara.F03890 10.0kb downstream 10.0kb downstream 10000 false A06: 29141806-29151805 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350177 5261 Brassicaceae Singleton cluster - no MSA
123840914 5264 Brassicales-Malvales View MSA
124338245 5266 SBM View MSA
124249224 5268 Malvidae View MSA
124070942 5270 Rosid View MSA
123749829 5271 Pentapetalae View MSA
122795221 5272 Eudicot View MSA
122046752 5273 Angiosperm View MSA
121348007 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier