Gene : Brara.G00399 B. rapa FPsc v1.3
Defline:  (1 of 5) PF00069//PF11721 - Protein kinase domain (Pkinase) // Di-glucose binding within endoplasmic reticulum (Malectin) Genomic Order:  399
Name:  ? Brara.G00399 Secondary Identifier:  ? PAC:30633573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00399 0.5kb upstream 0.5kb upstream 17243 true A07: 4290331-4307573 Brassica rapa FPsc
Brara.G00399 0.5kb upstream 0.5kb upstream 500 false A07: 4290331-4290830 Brassica rapa FPsc
Brara.G00399 0.5kb downstream 0.5kb downstream 17243 true A07: 4290831-4308073 Brassica rapa FPsc
Brara.G00399 0.5kb downstream 0.5kb downstream 500 false A07: 4307574-4308073 Brassica rapa FPsc
Brara.G00399 1.0kb upstream 1.0kb upstream 17743 true A07: 4289831-4307573 Brassica rapa FPsc
Brara.G00399 1.0kb upstream 1.0kb upstream 1000 false A07: 4289831-4290830 Brassica rapa FPsc
Brara.G00399 1.0kb downstream 1.0kb downstream 17743 true A07: 4290831-4308573 Brassica rapa FPsc
Brara.G00399 1.0kb downstream 1.0kb downstream 1000 false A07: 4307574-4308573 Brassica rapa FPsc
Brara.G00399 2.0kb upstream 2.0kb upstream 18743 true A07: 4288831-4307573 Brassica rapa FPsc
Brara.G00399 2.0kb upstream 2.0kb upstream 2000 false A07: 4288831-4290830 Brassica rapa FPsc
Brara.G00399 2.0kb downstream 2.0kb downstream 18743 true A07: 4290831-4309573 Brassica rapa FPsc
Brara.G00399 2.0kb downstream 2.0kb downstream 2000 false A07: 4307574-4309573 Brassica rapa FPsc
Brara.G00399 5.0kb upstream 5.0kb upstream 21743 true A07: 4285831-4307573 Brassica rapa FPsc
Brara.G00399 5.0kb upstream 5.0kb upstream 5000 false A07: 4285831-4290830 Brassica rapa FPsc
Brara.G00399 5.0kb downstream 5.0kb downstream 21743 true A07: 4290831-4312573 Brassica rapa FPsc
Brara.G00399 5.0kb downstream 5.0kb downstream 5000 false A07: 4307574-4312573 Brassica rapa FPsc
Brara.G00399 10.0kb upstream 10.0kb upstream 26743 true A07: 4280831-4307573 Brassica rapa FPsc
Brara.G00399 10.0kb upstream 10.0kb upstream 10000 false A07: 4280831-4290830 Brassica rapa FPsc
Brara.G00399 10.0kb downstream 10.0kb downstream 26743 true A07: 4290831-4317573 Brassica rapa FPsc
Brara.G00399 10.0kb downstream 10.0kb downstream 10000 false A07: 4307574-4317573 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351446 5261 Brassicaceae Singleton cluster - no MSA
123790330 5264 Brassicales-Malvales Singleton cluster - no MSA
124288291 5266 SBM Singleton cluster - no MSA
124252439 5268 Malvidae View MSA
124071299 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier