Protein Domain : IPR021153

Type:  Domain Name:  Heat-inducible transcription repressor HrcA, C-terminal
Description:  Prokaryotic cells have a defence mechanism against a sudden heat-shock stress. Commonly, they induce a set of proteins that protect cellular proteins from being denatured by heat. Among such proteins are the GroE and DnaK chaperones whose transcription is regulated by a heat-shock repressor protein HrcA. HrcA is a winged helix-turn-helix repressor that negatively regulates the transcription of dnaK and groE operons by binding the upstream CIRCE (controlling inverted repeat of chaperone expression) element. In Bacillus subtilisthis element is a perfect 9 base pair inverted repeat separated by a 9 base pair spacer. The crystal structure of a heat-inducible transcriptional repressor, HrcA, from Thermotoga maritimahas been reported at 2.2A resolution. HrcA is composed of three domains: an N-terminal winged helix-turn-helix domain (WHTH), a GAF-like domain, and an inserted dimerizing domain (IDD). The IDD shows a unique structural fold with an anti-parallel beta-sheet composed of three beta-strands sided by four alpha-helices. HrcA crystallises as a dimer, which is formed through hydrophobic contact between the IDDs and a limited contact that involves conserved residues between the GAF-like domains []. The structural studies suggest that the inactive form of HrcA is the dimer and this is converted to its DNA-binding form by interaction with GroEL, which binds to a conserved C-terminal sequence region [, ]. Comparison of the HrcA-CIRCE complexes from B. subtilis and Bacillus thermoglucosidasius(Geobacillus thermoglucosidasius), which grow at vastly different ranges of temperature shows that the thermostability profiles were consistent with the difference in the growth temperatures suggesting that HrcA can function as a thermosensor to detect temperature changes in cells []. Any increase in temperature causes the dissociation of the HrcA from the CIRCE complex with the concomitant activation of transcription of the groE and dnaK operons. This entry represents the C terminus of HrcA, consisting of the GAF-like domain with the inserted dimerising domain. Short Name:  HrcA_C

0 Child Features

0 Contains

1 Cross References

Identifier
PF01628

1 Found In

DB identifier Type Name
IPR002571 Family Heat-inducible transcription repressor HrcA

2 GO Annotations

GO Term Gene Name
GO:0003677 IPR021153
GO:0006355 IPR021153

2 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR021153
GO:0006355 IPR021153

0 Parent Features

1 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
33590.m000021 B9TF42 PAC:16825922 Ricinus communis 382  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15979091
            19277496
            12486078