Protein Domain : IPR019258

Type:  Family Name:  Mediator complex, subunit Med4
Description:  The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP.Members of this family represent the Med4 subunit of the Mediator (Med) complex [, ]. Short Name:  Mediator_Med4

0 Child Features

0 Contains

1 Cross References

Identifier
PF10018

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0001104 IPR019258
GO:0006357 IPR019258
GO:0016592 IPR019258

3 Ontology Annotations

GO Term Gene Name
GO:0001104 IPR019258
GO:0006357 IPR019258
GO:0016592 IPR019258

0 Parent Features

427 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29805.m001496 B9SGS3 PAC:16809202 Ricinus communis 401  
Cucsa.065660.1 A0A0A0KXB7 PAC:16955078 Cucumis sativus 404  
orange1.1g044000m A0A067EL12 PAC:18132024 Citrus sinensis 420  
AT5G02850.1 Q9LZ00 PAC:19671096 Arabidopsis thaliana 426  
Thhalv10013588m V4KQJ3 PAC:20206402 Eutrema salsugineum 435  
Ciclev10011831m V4ST57 PAC:20797562 Citrus clementina 420  
Lus10002749 PAC:23162052 Linum usitatissimum 410  
Potri.016G084200.1 B9IIY8 PAC:27011508 Populus trichocarpa 397  
Gorai.003G108400.3 A0A0D2MMA1 PAC:26799957 Gossypium raimondii 491  
Gorai.003G108400.2 A0A0D2MMA1 PAC:26799955 Gossypium raimondii 491  
Gorai.003G108400.1 A0A0D2MMA1 PAC:26799956 Gossypium raimondii 491  
56974 C1E1S3 PAC:27398547 Micromonas sp RCC299 227  
28716 A4RQM7 PAC:27417972 Ostreococcus lucimarinus 235  
Thecc1EG022075t1 A0A061EZR1 PAC:27423986 Theobroma cacao 417  
Migut.K00511.1.p A0A022R021 PAC:28937003 Mimulus guttatus 403  
Araha.6333s0001.1.p PAC:28860529 Arabidopsis halleri 333  
Cagra.2240s0020.1.p PAC:28911976 Capsella grandiflora 431  
Glyma.06G188800.1.p I1KCN1 PAC:30551340 Glycine max 388  
Glyma.08G287300.1.p I1KXG2 PAC:30541256 Glycine max 388  
Glyma.13G067700.1.p A0A0R0GT44 PAC:30502158 Glycine max 384  
Glyma.13G067700.6.p A0A0R0GT44 PAC:30502159 Glycine max 384  
Glyma.13G067700.3.p A0A0R0GT44 PAC:30502156 Glycine max 384  
Glyma.13G067700.5.p A0A0R0GT44 PAC:30502157 Glycine max 384  
Glyma.13G067700.4.p A0A0R0GT44 PAC:30502155 Glycine max 384  
Glyma.13G067700.2.p A0A0R0GT44 PAC:30502154 Glycine max 384  
Brara.C00087.1.p A0A397ZYC0 PAC:30616570 Brassica rapa FPsc 244  
Brara.J02850.1.p A0A397XP99 PAC:30613785 Brassica rapa FPsc 423  
Bostr.2128s0169.1.p PAC:30659275 Boechera stricta 429  
Medtr6g089780.1 G7KQF7 PAC:31105460 Medicago truncatula 400  
Medtr8g075790.1 G7LC42 PAC:31075181 Medicago truncatula 402  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10235266
            10235267