Protein Domain : IPR001119

Type:  Domain Name:  S-layer homology domain
Description:  S-layers are paracrystalline mono-layered assemblies of (glyco)proteins which coat the surface of bacteria [, ]. Several S-layer proteins and some other cell wall proteins contain one or more copies of a domain of about 50-60 residues, which has been called SLH (for S-layer homology). Although it was originally proposed that SLH domains bind to peptidoglycan, it is now evident that pyruvylated secondary cell wall polymers (SCWPs), which are either teichoic acids, teichuronic acids, lipoteichoic acids or lipoglycans, serve as the anchoring structures for SLH motifs in the Gram-positive cell wall [, ]. However, the study of S-layer protein SbpA of Bacillus sphaericusrevealed that SLH motifs are not sufficient for specific binding to SCWPs. Thus, the molecular basis explaining SLH affinity and specificity of interaction with cell wall polymers are not completely elucidated []. Short Name:  SLH_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF00395
PS51272

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

636 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29738.m001033 B9SEH4 PAC:16807324 Ricinus communis 564  
30169.m006251 B9RIX1 PAC:16821054 Ricinus communis 976  
orange1.1g017472m A0A067FRW5 PAC:18121893 Citrus sinensis 371  
AT5G23890.1 Q9FF91 PAC:19667660 Arabidopsis thaliana 946  
AT5G52410.2 F4KG64 PAC:19670987 Arabidopsis thaliana 761  
AT5G52410.1 F4KG65 PAC:19670988 Arabidopsis thaliana 510  
AT3G25680.1 F4JA39 PAC:19664105 Arabidopsis thaliana 558  
Thhalv10003715m V4KX23 PAC:20198198 Eutrema salsugineum 730  
Thhalv10003612m V4KL20 PAC:20198197 Eutrema salsugineum 942  
Thhalv10003928m V4MMZ2 PAC:20199001 Eutrema salsugineum 559  
Ciclev10031108m V4TCI1 PAC:20805832 Citrus clementina 564  
Ciclev10031196m V4TMC7 PAC:20805833 Citrus clementina 534  
Lus10021714 PAC:23180353 Linum usitatissimum 676  
Lus10035054 PAC:23162408 Linum usitatissimum 582  
Potri.015G145700.2 A0A2K1XN19 PAC:27019607 Populus trichocarpa 977  
Potri.015G145700.1 PAC:27019606 Populus trichocarpa 984  
Gorai.008G187100.4 A0A0D2RHT9 PAC:26817853 Gossypium raimondii 549  
Gorai.008G187100.3 A0A0D2PXC2 PAC:26817852 Gossypium raimondii 565  
Gorai.008G187100.2 A0A0D2T8H4 PAC:26817851 Gossypium raimondii 585  
Gorai.008G187100.1 A0A0D2T2U2 PAC:26817850 Gossypium raimondii 595  
Gorai.006G048600.8 A0A0D2NLZ9 PAC:26831812 Gossypium raimondii 443  
Gorai.006G048600.3 A0A0D2SS84 PAC:26831809 Gossypium raimondii 599  
Gorai.006G048600.4 A0A0D2Q3G5 PAC:26831810 Gossypium raimondii 572  
Gorai.006G048600.7 A0A0D2RXB7 PAC:26831811 Gossypium raimondii 566  
Gorai.006G048600.1 A0A0D2RXB4 PAC:26831805 Gossypium raimondii 954  
Gorai.006G048600.5 A0A0D2NLZ6 PAC:26831806 Gossypium raimondii 858  
Gorai.006G048600.2 A0A0D2RQI0 PAC:26831808 Gossypium raimondii 695  
Gorai.006G048600.6 A0A0D2SS80 PAC:26831807 Gossypium raimondii 831  
Thecc1EG011881t1 A0A061ECR3 PAC:27463576 Theobroma cacao 584  
Thecc1EG015192t1 A0A061G0Y8 PAC:27450035 Theobroma cacao 968  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10366863
            10648507
            10049812
            15758211
            16487313